Gene : Seita.1G291500 S. italica v2.2
Defline:  (1 of 1) PTHR22884:SF299 - HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 Genomic Order:  2915
Name:  ? Seita.1G291500 Secondary Identifier:  ? PAC:32698097
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G291500 0.5kb upstream 0.5kb upstream 13138 true scaffold_1: 36020366-36033503 Setaria italica
Seita.1G291500 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 36020366-36020865 Setaria italica
Seita.1G291500 0.5kb downstream 0.5kb downstream 13138 true scaffold_1: 36020866-36034003 Setaria italica
Seita.1G291500 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 36033504-36034003 Setaria italica
Seita.1G291500 1.0kb upstream 1.0kb upstream 13638 true scaffold_1: 36019866-36033503 Setaria italica
Seita.1G291500 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 36019866-36020865 Setaria italica
Seita.1G291500 1.0kb downstream 1.0kb downstream 13638 true scaffold_1: 36020866-36034503 Setaria italica
Seita.1G291500 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 36033504-36034503 Setaria italica
Seita.1G291500 2.0kb upstream 2.0kb upstream 14638 true scaffold_1: 36018866-36033503 Setaria italica
Seita.1G291500 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 36018866-36020865 Setaria italica
Seita.1G291500 2.0kb downstream 2.0kb downstream 14638 true scaffold_1: 36020866-36035503 Setaria italica
Seita.1G291500 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 36033504-36035503 Setaria italica
Seita.1G291500 5.0kb upstream 5.0kb upstream 17638 true scaffold_1: 36015866-36033503 Setaria italica
Seita.1G291500 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 36015866-36020865 Setaria italica
Seita.1G291500 5.0kb downstream 5.0kb downstream 17638 true scaffold_1: 36020866-36038503 Setaria italica
Seita.1G291500 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 36033504-36038503 Setaria italica
Seita.1G291500 10.0kb upstream 10.0kb upstream 22638 true scaffold_1: 36010866-36033503 Setaria italica
Seita.1G291500 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 36010866-36020865 Setaria italica
Seita.1G291500 10.0kb downstream 10.0kb downstream 22638 true scaffold_1: 36020866-36043503 Setaria italica
Seita.1G291500 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 36033504-36043503 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180413 5267 Panicoideae View MSA
124581257 5269 Grass View MSA
122047705 5273 Angiosperm View MSA
121347776 5274 Embryophyte View MSA
123380624 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.249       High
cufflinks 5.064       High
cufflinks 3.724        
cufflinks 2.914        
cufflinks 2.491       Low
cufflinks 4.355        
cufflinks 4.821        
cufflinks 2.589       Low
cufflinks 3.543        
cufflinks 2.636       Low
cufflinks 4.396        
cufflinks 3.57        
cufflinks 2.979        
cufflinks 3.228        
cufflinks 4.156        
cufflinks 5.756       High
cufflinks 2.602       Low
cufflinks 7.164       High
cufflinks 2.459       Low
cufflinks 2.847        

0 Strain