Gene : Seita.1G305900 S. italica v2.2
Defline:  (1 of 24) PF00581 - Rhodanese-like domain Genomic Order:  3059
Name:  ? Seita.1G305900 Secondary Identifier:  ? PAC:32698361
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G305900 0.5kb upstream 0.5kb upstream 3268 true scaffold_1: 36969391-36972658 Setaria italica
Seita.1G305900 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 36972159-36972658 Setaria italica
Seita.1G305900 0.5kb downstream 0.5kb downstream 3268 true scaffold_1: 36968891-36972158 Setaria italica
Seita.1G305900 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 36968891-36969390 Setaria italica
Seita.1G305900 1.0kb upstream 1.0kb upstream 3768 true scaffold_1: 36969391-36973158 Setaria italica
Seita.1G305900 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 36972159-36973158 Setaria italica
Seita.1G305900 1.0kb downstream 1.0kb downstream 3768 true scaffold_1: 36968391-36972158 Setaria italica
Seita.1G305900 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 36968391-36969390 Setaria italica
Seita.1G305900 2.0kb upstream 2.0kb upstream 4768 true scaffold_1: 36969391-36974158 Setaria italica
Seita.1G305900 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 36972159-36974158 Setaria italica
Seita.1G305900 2.0kb downstream 2.0kb downstream 4768 true scaffold_1: 36967391-36972158 Setaria italica
Seita.1G305900 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 36967391-36969390 Setaria italica
Seita.1G305900 5.0kb upstream 5.0kb upstream 7768 true scaffold_1: 36969391-36977158 Setaria italica
Seita.1G305900 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 36972159-36977158 Setaria italica
Seita.1G305900 5.0kb downstream 5.0kb downstream 7768 true scaffold_1: 36964391-36972158 Setaria italica
Seita.1G305900 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 36964391-36969390 Setaria italica
Seita.1G305900 10.0kb upstream 10.0kb upstream 12768 true scaffold_1: 36969391-36982158 Setaria italica
Seita.1G305900 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 36972159-36982158 Setaria italica
Seita.1G305900 10.0kb downstream 10.0kb downstream 12768 true scaffold_1: 36959391-36972158 Setaria italica
Seita.1G305900 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 36959391-36969390 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041508 5273 Angiosperm View MSA
122179327 5267 Panicoideae View MSA
124568527 5269 Grass View MSA
121347966 5274 Embryophyte View MSA
123427649 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.797        
cufflinks 0.856        
cufflinks 11.782     High  
cufflinks 27.563     High High
cufflinks 38.165     High High
cufflinks 1.224        
cufflinks 6.786        
cufflinks 23.176     High High
cufflinks 16.874     High  
cufflinks 0.587        
cufflinks 0.299       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.096     Low Low
cufflinks 2.366        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 13.99     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.847        
cufflinks 29.529     High High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain