Gene : Seita.1G314200 S. italica v2.2
Defline:  (1 of 2) PTHR11566//PTHR11566:SF61 - DYNAMIN Genomic Order:  3142
Name:  ? Seita.1G314200 Secondary Identifier:  ? PAC:32696585
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G314200 0.5kb upstream 0.5kb upstream 10834 true scaffold_1: 37525772-37536605 Setaria italica
Seita.1G314200 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 37536106-37536605 Setaria italica
Seita.1G314200 0.5kb downstream 0.5kb downstream 10834 true scaffold_1: 37525272-37536105 Setaria italica
Seita.1G314200 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 37525272-37525771 Setaria italica
Seita.1G314200 1.0kb upstream 1.0kb upstream 11334 true scaffold_1: 37525772-37537105 Setaria italica
Seita.1G314200 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 37536106-37537105 Setaria italica
Seita.1G314200 1.0kb downstream 1.0kb downstream 11334 true scaffold_1: 37524772-37536105 Setaria italica
Seita.1G314200 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 37524772-37525771 Setaria italica
Seita.1G314200 2.0kb upstream 2.0kb upstream 12334 true scaffold_1: 37525772-37538105 Setaria italica
Seita.1G314200 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 37536106-37538105 Setaria italica
Seita.1G314200 2.0kb downstream 2.0kb downstream 12334 true scaffold_1: 37523772-37536105 Setaria italica
Seita.1G314200 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 37523772-37525771 Setaria italica
Seita.1G314200 5.0kb upstream 5.0kb upstream 15334 true scaffold_1: 37525772-37541105 Setaria italica
Seita.1G314200 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 37536106-37541105 Setaria italica
Seita.1G314200 5.0kb downstream 5.0kb downstream 15334 true scaffold_1: 37520772-37536105 Setaria italica
Seita.1G314200 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 37520772-37525771 Setaria italica
Seita.1G314200 10.0kb upstream 10.0kb upstream 20334 true scaffold_1: 37525772-37546105 Setaria italica
Seita.1G314200 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 37536106-37546105 Setaria italica
Seita.1G314200 10.0kb downstream 10.0kb downstream 20334 true scaffold_1: 37515772-37536105 Setaria italica
Seita.1G314200 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 37515772-37525771 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188633 5267 Panicoideae View MSA
124576204 5269 Grass View MSA
122046825 5273 Angiosperm View MSA
123428904 5275 Viridiplantae View MSA
121349714 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.351        
cufflinks 15.258     High High
cufflinks 3.878       Low
cufflinks 2.664       Low
cufflinks 2.383       Low
cufflinks 14.02     High High
cufflinks 10.042        
cufflinks 7.537        
cufflinks 6.277        
cufflinks 6.55        
cufflinks 12.893        
cufflinks 9.746        
cufflinks 8.383        
cufflinks 5.616        
cufflinks 14.922     High High
cufflinks 5.039        
cufflinks 9.6        
cufflinks 4.56        
cufflinks 3.267       Low
cufflinks 14.078       High

0 Strain