Gene : Seita.1G360100 S. italica v2.2
Defline:  (1 of 1) PTHR24115:SF416 - PHRAGMOPLAST-ASSOCIATED KINESIN-RELATED PROTEIN 2 Genomic Order:  3601
Name:  ? Seita.1G360100 Secondary Identifier:  ? PAC:32694779
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G360100 0.5kb upstream 0.5kb upstream 5212 true scaffold_1: 41023087-41028298 Setaria italica
Seita.1G360100 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 41027799-41028298 Setaria italica
Seita.1G360100 0.5kb downstream 0.5kb downstream 5212 true scaffold_1: 41022587-41027798 Setaria italica
Seita.1G360100 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 41022587-41023086 Setaria italica
Seita.1G360100 1.0kb upstream 1.0kb upstream 5712 true scaffold_1: 41023087-41028798 Setaria italica
Seita.1G360100 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 41027799-41028798 Setaria italica
Seita.1G360100 1.0kb downstream 1.0kb downstream 5712 true scaffold_1: 41022087-41027798 Setaria italica
Seita.1G360100 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 41022087-41023086 Setaria italica
Seita.1G360100 2.0kb upstream 2.0kb upstream 6712 true scaffold_1: 41023087-41029798 Setaria italica
Seita.1G360100 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 41027799-41029798 Setaria italica
Seita.1G360100 2.0kb downstream 2.0kb downstream 6712 true scaffold_1: 41021087-41027798 Setaria italica
Seita.1G360100 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 41021087-41023086 Setaria italica
Seita.1G360100 5.0kb upstream 5.0kb upstream 9712 true scaffold_1: 41023087-41032798 Setaria italica
Seita.1G360100 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 41027799-41032798 Setaria italica
Seita.1G360100 5.0kb downstream 5.0kb downstream 9712 true scaffold_1: 41018087-41027798 Setaria italica
Seita.1G360100 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 41018087-41023086 Setaria italica
Seita.1G360100 10.0kb upstream 10.0kb upstream 14712 true scaffold_1: 41023087-41037798 Setaria italica
Seita.1G360100 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 41027799-41037798 Setaria italica
Seita.1G360100 10.0kb downstream 10.0kb downstream 14712 true scaffold_1: 41013087-41027798 Setaria italica
Seita.1G360100 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 41013087-41023086 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177705 5267 Panicoideae View MSA
124579356 5269 Grass View MSA
122045552 5273 Angiosperm View MSA
121347555 5274 Embryophyte View MSA
123380571 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.667        
cufflinks 10.432        
cufflinks 0.054     Low Low
cufflinks 0.075     Low Low
cufflinks 0.086       Low
cufflinks 9.378        
cufflinks 7.069        
cufflinks 8.147        
cufflinks 5.156        
cufflinks 2.947        
cufflinks 5.931        
cufflinks 4.613        
cufflinks 1.511        
cufflinks 0.098     Low Low
cufflinks 8.465        
cufflinks 0.812        
cufflinks 6.102        
cufflinks 0.532        
cufflinks 0.071     Low Low
cufflinks 7.808        

0 Strain