Gene : Seita.1G378500 S. italica v2.2
Defline:  (1 of 1) PTHR35689:SF1 - F10B6.4 Genomic Order:  3785
Name:  ? Seita.1G378500 Secondary Identifier:  ? PAC:32698195
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G378500 0.5kb upstream 0.5kb upstream 4863 true scaffold_1: 41985456-41990318 Setaria italica
Seita.1G378500 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 41989819-41990318 Setaria italica
Seita.1G378500 0.5kb downstream 0.5kb downstream 4863 true scaffold_1: 41984956-41989818 Setaria italica
Seita.1G378500 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 41984956-41985455 Setaria italica
Seita.1G378500 1.0kb upstream 1.0kb upstream 5363 true scaffold_1: 41985456-41990818 Setaria italica
Seita.1G378500 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 41989819-41990818 Setaria italica
Seita.1G378500 1.0kb downstream 1.0kb downstream 5363 true scaffold_1: 41984456-41989818 Setaria italica
Seita.1G378500 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 41984456-41985455 Setaria italica
Seita.1G378500 2.0kb upstream 2.0kb upstream 6363 true scaffold_1: 41985456-41991818 Setaria italica
Seita.1G378500 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 41989819-41991818 Setaria italica
Seita.1G378500 2.0kb downstream 2.0kb downstream 6363 true scaffold_1: 41983456-41989818 Setaria italica
Seita.1G378500 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 41983456-41985455 Setaria italica
Seita.1G378500 5.0kb upstream 5.0kb upstream 9363 true scaffold_1: 41985456-41994818 Setaria italica
Seita.1G378500 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 41989819-41994818 Setaria italica
Seita.1G378500 5.0kb downstream 5.0kb downstream 9363 true scaffold_1: 41980456-41989818 Setaria italica
Seita.1G378500 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 41980456-41985455 Setaria italica
Seita.1G378500 10.0kb upstream 10.0kb upstream 14363 true scaffold_1: 41985456-41999818 Setaria italica
Seita.1G378500 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 41989819-41999818 Setaria italica
Seita.1G378500 10.0kb downstream 10.0kb downstream 14363 true scaffold_1: 41975456-41989818 Setaria italica
Seita.1G378500 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 41975456-41985455 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181215 5267 Panicoideae View MSA
124571377 5269 Grass View MSA
122047670 5273 Angiosperm View MSA
121344374 5274 Embryophyte View MSA
123380030 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain