Gene : Seita.J017800 S. italica v2.2
Defline:  (1 of 3) PTHR11880:SF9 - RIBOSOMAL PROTEIN S19, MITOCHONDRIAL Genomic Order:  52
Name:  ? Seita.J017800 Secondary Identifier:  ? PAC:32706098
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.J017800 0.5kb upstream 0.5kb upstream 782 true scaffold_14: 80054-80835 Setaria italica
Seita.J017800 0.5kb upstream 0.5kb upstream 500 false scaffold_14: 80054-80553 Setaria italica
Seita.J017800 0.5kb downstream 0.5kb downstream 782 true scaffold_14: 80554-81335 Setaria italica
Seita.J017800 0.5kb downstream 0.5kb downstream 500 false scaffold_14: 80836-81335 Setaria italica
Seita.J017800 1.0kb upstream 1.0kb upstream 1282 true scaffold_14: 79554-80835 Setaria italica
Seita.J017800 1.0kb upstream 1.0kb upstream 1000 false scaffold_14: 79554-80553 Setaria italica
Seita.J017800 1.0kb downstream 1.0kb downstream 1282 true scaffold_14: 80554-81835 Setaria italica
Seita.J017800 1.0kb downstream 1.0kb downstream 1000 false scaffold_14: 80836-81835 Setaria italica
Seita.J017800 2.0kb upstream 2.0kb upstream 2282 true scaffold_14: 78554-80835 Setaria italica
Seita.J017800 2.0kb upstream 2.0kb upstream 2000 false scaffold_14: 78554-80553 Setaria italica
Seita.J017800 2.0kb downstream 2.0kb downstream 2282 true scaffold_14: 80554-82835 Setaria italica
Seita.J017800 2.0kb downstream 2.0kb downstream 2000 false scaffold_14: 80836-82835 Setaria italica
Seita.J017800 5.0kb upstream 5.0kb upstream 5282 true scaffold_14: 75554-80835 Setaria italica
Seita.J017800 5.0kb upstream 5.0kb upstream 5000 false scaffold_14: 75554-80553 Setaria italica
Seita.J017800 5.0kb downstream 5.0kb downstream 5282 true scaffold_14: 80554-85835 Setaria italica
Seita.J017800 5.0kb downstream 5.0kb downstream 5000 false scaffold_14: 80836-85835 Setaria italica
Seita.J017800 10.0kb upstream 10.0kb upstream 10282 true scaffold_14: 70554-80835 Setaria italica
Seita.J017800 10.0kb upstream 10.0kb upstream 10000 false scaffold_14: 70554-80553 Setaria italica
Seita.J017800 10.0kb downstream 10.0kb downstream 10282 true scaffold_14: 80554-90835 Setaria italica
Seita.J017800 10.0kb downstream 10.0kb downstream 10000 false scaffold_14: 80836-90835 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028835 5273 Angiosperm View MSA
122178381 5267 Panicoideae View MSA
124590369 5269 Grass View MSA
121349820 5274 Embryophyte View MSA
123426657 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.56        
cufflinks 0.335        
cufflinks 0.338        
cufflinks 0.375        
cufflinks 0.579        
cufflinks 0.061     Low Low
cufflinks 0.81        
cufflinks 1.744        
cufflinks 0.531        
cufflinks 107.435     High High
cufflinks 3.445       High
cufflinks 1.806        
cufflinks 1.55        
cufflinks 0.912        
cufflinks 0.743        
cufflinks 0.279        
cufflinks 0.436        
cufflinks 0.709        
cufflinks 0.407        
cufflinks 0.493        

0 Strain