Gene : Seita.1G324700 S. italica v2.2
Defline:  (1 of 1) PTHR10916 - 60S RIBOSOMAL PROTEIN L35/50S RIBOSOMAL PROTEIN L29 Genomic Order:  3247
Name:  ? Seita.1G324700 Secondary Identifier:  ? PAC:32698249
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G324700 0.5kb upstream 0.5kb upstream 2410 true scaffold_1: 38413625-38416034 Setaria italica
Seita.1G324700 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 38413625-38414124 Setaria italica
Seita.1G324700 0.5kb downstream 0.5kb downstream 2410 true scaffold_1: 38414125-38416534 Setaria italica
Seita.1G324700 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 38416035-38416534 Setaria italica
Seita.1G324700 1.0kb upstream 1.0kb upstream 2910 true scaffold_1: 38413125-38416034 Setaria italica
Seita.1G324700 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 38413125-38414124 Setaria italica
Seita.1G324700 1.0kb downstream 1.0kb downstream 2910 true scaffold_1: 38414125-38417034 Setaria italica
Seita.1G324700 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 38416035-38417034 Setaria italica
Seita.1G324700 2.0kb upstream 2.0kb upstream 3910 true scaffold_1: 38412125-38416034 Setaria italica
Seita.1G324700 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 38412125-38414124 Setaria italica
Seita.1G324700 2.0kb downstream 2.0kb downstream 3910 true scaffold_1: 38414125-38418034 Setaria italica
Seita.1G324700 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 38416035-38418034 Setaria italica
Seita.1G324700 5.0kb upstream 5.0kb upstream 6910 true scaffold_1: 38409125-38416034 Setaria italica
Seita.1G324700 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 38409125-38414124 Setaria italica
Seita.1G324700 5.0kb downstream 5.0kb downstream 6910 true scaffold_1: 38414125-38421034 Setaria italica
Seita.1G324700 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 38416035-38421034 Setaria italica
Seita.1G324700 10.0kb upstream 10.0kb upstream 11910 true scaffold_1: 38404125-38416034 Setaria italica
Seita.1G324700 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 38404125-38414124 Setaria italica
Seita.1G324700 10.0kb downstream 10.0kb downstream 11910 true scaffold_1: 38414125-38426034 Setaria italica
Seita.1G324700 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 38416035-38426034 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186376 5267 Panicoideae View MSA
124574500 5269 Grass View MSA
122048296 5273 Angiosperm View MSA
121344034 5274 Embryophyte View MSA
123424171 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.953        
cufflinks 13.333     High  
cufflinks 8.405        
cufflinks 5.874        
cufflinks 29.511     High  
cufflinks 12.649        
cufflinks 38.922     High High
cufflinks 84.346     High High
cufflinks 91.556     High High
cufflinks 9.558        
cufflinks 6.519        
cufflinks 0.332       Low
cufflinks 0.964       Low
cufflinks 19.228     High  
cufflinks 0.781       Low
cufflinks 20.235     High  
cufflinks 0.681       Low
cufflinks 4.142        
cufflinks 5.512        
cufflinks 0.79       Low

0 Strain