Gene : Seita.2G075800 S. italica v2.2
Defline:  (1 of 2) PF08700//PF16528 - Vps51/Vps67 (Vps51) // Exocyst component 84 C-terminal (Exo84_C) Genomic Order:  758
Name:  ? Seita.2G075800 Secondary Identifier:  ? PAC:32720782
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G075800 0.5kb upstream 0.5kb upstream 7818 true scaffold_2: 6322043-6329860 Setaria italica
Seita.2G075800 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 6322043-6322542 Setaria italica
Seita.2G075800 0.5kb downstream 0.5kb downstream 7818 true scaffold_2: 6322543-6330360 Setaria italica
Seita.2G075800 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 6329861-6330360 Setaria italica
Seita.2G075800 1.0kb upstream 1.0kb upstream 8318 true scaffold_2: 6321543-6329860 Setaria italica
Seita.2G075800 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 6321543-6322542 Setaria italica
Seita.2G075800 1.0kb downstream 1.0kb downstream 8318 true scaffold_2: 6322543-6330860 Setaria italica
Seita.2G075800 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 6329861-6330860 Setaria italica
Seita.2G075800 2.0kb upstream 2.0kb upstream 9318 true scaffold_2: 6320543-6329860 Setaria italica
Seita.2G075800 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 6320543-6322542 Setaria italica
Seita.2G075800 2.0kb downstream 2.0kb downstream 9318 true scaffold_2: 6322543-6331860 Setaria italica
Seita.2G075800 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 6329861-6331860 Setaria italica
Seita.2G075800 5.0kb upstream 5.0kb upstream 12318 true scaffold_2: 6317543-6329860 Setaria italica
Seita.2G075800 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 6317543-6322542 Setaria italica
Seita.2G075800 5.0kb downstream 5.0kb downstream 12318 true scaffold_2: 6322543-6334860 Setaria italica
Seita.2G075800 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 6329861-6334860 Setaria italica
Seita.2G075800 10.0kb upstream 10.0kb upstream 17318 true scaffold_2: 6312543-6329860 Setaria italica
Seita.2G075800 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 6312543-6322542 Setaria italica
Seita.2G075800 10.0kb downstream 10.0kb downstream 17318 true scaffold_2: 6322543-6339860 Setaria italica
Seita.2G075800 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 6329861-6339860 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178063 5267 Panicoideae View MSA
124578423 5269 Grass View MSA
122045768 5273 Angiosperm View MSA
121346078 5274 Embryophyte View MSA
123428165 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.264        
cufflinks 10.603       High
cufflinks 3.0       Low
cufflinks 2.296       Low
cufflinks 2.506       Low
cufflinks 9.612        
cufflinks 8.523        
cufflinks 4.379        
cufflinks 4.887        
cufflinks 7.155        
cufflinks 11.428       High
cufflinks 7.022        
cufflinks 8.41        
cufflinks 3.103       Low
cufflinks 11.165       High
cufflinks 6.792        
cufflinks 7.082        
cufflinks 6.718        
cufflinks 3.271       Low
cufflinks 8.868        

0 Strain