Gene : Seita.2G084000 S. italica v2.2
Defline:  (1 of 1) PTHR20863:SF5 - ACYL CARRIER PROTEIN, MITOCHONDRIAL Genomic Order:  840
Name:  ? Seita.2G084000 Secondary Identifier:  ? PAC:32723573
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G084000 0.5kb upstream 0.5kb upstream 1528 true scaffold_2: 7322829-7324356 Setaria italica
Seita.2G084000 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 7322829-7323328 Setaria italica
Seita.2G084000 0.5kb downstream 0.5kb downstream 1528 true scaffold_2: 7323329-7324856 Setaria italica
Seita.2G084000 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 7324357-7324856 Setaria italica
Seita.2G084000 1.0kb upstream 1.0kb upstream 2028 true scaffold_2: 7322329-7324356 Setaria italica
Seita.2G084000 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 7322329-7323328 Setaria italica
Seita.2G084000 1.0kb downstream 1.0kb downstream 2028 true scaffold_2: 7323329-7325356 Setaria italica
Seita.2G084000 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 7324357-7325356 Setaria italica
Seita.2G084000 2.0kb upstream 2.0kb upstream 3028 true scaffold_2: 7321329-7324356 Setaria italica
Seita.2G084000 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 7321329-7323328 Setaria italica
Seita.2G084000 2.0kb downstream 2.0kb downstream 3028 true scaffold_2: 7323329-7326356 Setaria italica
Seita.2G084000 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 7324357-7326356 Setaria italica
Seita.2G084000 5.0kb upstream 5.0kb upstream 6028 true scaffold_2: 7318329-7324356 Setaria italica
Seita.2G084000 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 7318329-7323328 Setaria italica
Seita.2G084000 5.0kb downstream 5.0kb downstream 6028 true scaffold_2: 7323329-7329356 Setaria italica
Seita.2G084000 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 7324357-7329356 Setaria italica
Seita.2G084000 10.0kb upstream 10.0kb upstream 11028 true scaffold_2: 7313329-7324356 Setaria italica
Seita.2G084000 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 7313329-7323328 Setaria italica
Seita.2G084000 10.0kb downstream 10.0kb downstream 11028 true scaffold_2: 7323329-7334356 Setaria italica
Seita.2G084000 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 7324357-7334356 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189838 5267 Panicoideae View MSA
124579081 5269 Grass View MSA
122046821 5273 Angiosperm View MSA
121348807 5274 Embryophyte View MSA
123423791 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.566     High  
cufflinks 14.848     High  
cufflinks 8.134       Low
cufflinks 9.282        
cufflinks 11.603     High  
cufflinks 17.807     High  
cufflinks 13.577     High  
cufflinks 41.39     High High
cufflinks 21.06     High  
cufflinks 66.444     High High
cufflinks 20.065     High  
cufflinks 17.145     High  
cufflinks 24.177     High  
cufflinks 17.01     High  
cufflinks 20.892     High  
cufflinks 7.251       Low
cufflinks 33.392     High High
cufflinks 4.484       Low
cufflinks 13.39     High  
cufflinks 35.207     High High

0 Strain