Gene : Seita.2G001400 S. italica v2.2
Defline:  (1 of 1) PTHR11206//PTHR11206:SF169 - MULTIDRUG RESISTANCE PROTEIN Genomic Order:  14
Name:  ? Seita.2G001400 Secondary Identifier:  ? PAC:32718924
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G001400 0.5kb upstream 0.5kb upstream 4691 true scaffold_2: 78094-82784 Setaria italica
Seita.2G001400 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 82285-82784 Setaria italica
Seita.2G001400 0.5kb downstream 0.5kb downstream 4691 true scaffold_2: 77594-82284 Setaria italica
Seita.2G001400 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 77594-78093 Setaria italica
Seita.2G001400 1.0kb upstream 1.0kb upstream 5191 true scaffold_2: 78094-83284 Setaria italica
Seita.2G001400 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 82285-83284 Setaria italica
Seita.2G001400 1.0kb downstream 1.0kb downstream 5191 true scaffold_2: 77094-82284 Setaria italica
Seita.2G001400 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 77094-78093 Setaria italica
Seita.2G001400 2.0kb upstream 2.0kb upstream 6191 true scaffold_2: 78094-84284 Setaria italica
Seita.2G001400 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 82285-84284 Setaria italica
Seita.2G001400 2.0kb downstream 2.0kb downstream 6191 true scaffold_2: 76094-82284 Setaria italica
Seita.2G001400 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 76094-78093 Setaria italica
Seita.2G001400 5.0kb upstream 5.0kb upstream 9191 true scaffold_2: 78094-87284 Setaria italica
Seita.2G001400 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 82285-87284 Setaria italica
Seita.2G001400 5.0kb downstream 5.0kb downstream 9191 true scaffold_2: 73094-82284 Setaria italica
Seita.2G001400 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 73094-78093 Setaria italica
Seita.2G001400 10.0kb upstream 10.0kb upstream 14191 true scaffold_2: 78094-92284 Setaria italica
Seita.2G001400 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 82285-92284 Setaria italica
Seita.2G001400 10.0kb downstream 10.0kb downstream 14191 true scaffold_2: 68094-82284 Setaria italica
Seita.2G001400 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 68094-78093 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041256 5273 Angiosperm View MSA
122190392 5267 Panicoideae View MSA
124571452 5269 Grass View MSA
121309822 5274 Embryophyte View MSA
123347474 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.952        
cufflinks 0.659        
cufflinks 0.245        
cufflinks 0.209       Low
cufflinks 0.306        
cufflinks 0.758        
cufflinks 0.319        
cufflinks 0.684        
cufflinks 0.484        
cufflinks 5.311       High
cufflinks 1.476        
cufflinks 5.195       High
cufflinks 1.76        
cufflinks 0.38        
cufflinks 7.554       High
cufflinks 0.262        
cufflinks 4.178       High
cufflinks 0.085     Low Low
cufflinks 0.288        
cufflinks 10.256       High

0 Strain