Gene : Seita.2G136100 S. italica v2.2
Defline:  (1 of 2) PTHR11662:SF255 - ANION TRANSPORTER 2, CHLOROPLASTIC-RELATED Genomic Order:  1361
Name:  ? Seita.2G136100 Secondary Identifier:  ? PAC:32719242
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G136100 0.5kb upstream 0.5kb upstream 5516 true scaffold_2: 15603365-15608880 Setaria italica
Seita.2G136100 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 15603365-15603864 Setaria italica
Seita.2G136100 0.5kb downstream 0.5kb downstream 5516 true scaffold_2: 15603865-15609380 Setaria italica
Seita.2G136100 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 15608881-15609380 Setaria italica
Seita.2G136100 1.0kb upstream 1.0kb upstream 6016 true scaffold_2: 15602865-15608880 Setaria italica
Seita.2G136100 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 15602865-15603864 Setaria italica
Seita.2G136100 1.0kb downstream 1.0kb downstream 6016 true scaffold_2: 15603865-15609880 Setaria italica
Seita.2G136100 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 15608881-15609880 Setaria italica
Seita.2G136100 2.0kb upstream 2.0kb upstream 7016 true scaffold_2: 15601865-15608880 Setaria italica
Seita.2G136100 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 15601865-15603864 Setaria italica
Seita.2G136100 2.0kb downstream 2.0kb downstream 7016 true scaffold_2: 15603865-15610880 Setaria italica
Seita.2G136100 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 15608881-15610880 Setaria italica
Seita.2G136100 5.0kb upstream 5.0kb upstream 10016 true scaffold_2: 15598865-15608880 Setaria italica
Seita.2G136100 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 15598865-15603864 Setaria italica
Seita.2G136100 5.0kb downstream 5.0kb downstream 10016 true scaffold_2: 15603865-15613880 Setaria italica
Seita.2G136100 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 15608881-15613880 Setaria italica
Seita.2G136100 10.0kb upstream 10.0kb upstream 15016 true scaffold_2: 15593865-15608880 Setaria italica
Seita.2G136100 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 15593865-15603864 Setaria italica
Seita.2G136100 10.0kb downstream 10.0kb downstream 15016 true scaffold_2: 15603865-15618880 Setaria italica
Seita.2G136100 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 15608881-15618880 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041210 5273 Angiosperm View MSA
122116462 5267 Panicoideae View MSA
124411000 5269 Grass View MSA
121348042 5274 Embryophyte View MSA
123427731 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.543        
cufflinks 8.151        
cufflinks 12.468     High High
cufflinks 10.334        
cufflinks 10.376        
cufflinks 7.695        
cufflinks 9.463        
cufflinks 10.401        
cufflinks 12.846     High High
cufflinks 3.114        
cufflinks 3.344        
cufflinks 1.672       Low
cufflinks 2.841       Low
cufflinks 11.189        
cufflinks 5.033        
cufflinks 9.428        
cufflinks 3.024        
cufflinks 1.699       Low
cufflinks 10.973        
cufflinks 2.689       Low

0 Strain