Gene : Seita.2G148500 S. italica v2.2
Defline:  (1 of 1) PTHR13793:SF100 - HISTONE-LYSINE N-METHYLTRANSFERASE ATX1-RELATED Genomic Order:  1485
Name:  ? Seita.2G148500 Secondary Identifier:  ? PAC:32723122
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G148500 0.5kb upstream 0.5kb upstream 14999 true scaffold_2: 19909305-19924303 Setaria italica
Seita.2G148500 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 19923804-19924303 Setaria italica
Seita.2G148500 0.5kb downstream 0.5kb downstream 14999 true scaffold_2: 19908805-19923803 Setaria italica
Seita.2G148500 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 19908805-19909304 Setaria italica
Seita.2G148500 1.0kb upstream 1.0kb upstream 15499 true scaffold_2: 19909305-19924803 Setaria italica
Seita.2G148500 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 19923804-19924803 Setaria italica
Seita.2G148500 1.0kb downstream 1.0kb downstream 15499 true scaffold_2: 19908305-19923803 Setaria italica
Seita.2G148500 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 19908305-19909304 Setaria italica
Seita.2G148500 2.0kb upstream 2.0kb upstream 16499 true scaffold_2: 19909305-19925803 Setaria italica
Seita.2G148500 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 19923804-19925803 Setaria italica
Seita.2G148500 2.0kb downstream 2.0kb downstream 16499 true scaffold_2: 19907305-19923803 Setaria italica
Seita.2G148500 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 19907305-19909304 Setaria italica
Seita.2G148500 5.0kb upstream 5.0kb upstream 19499 true scaffold_2: 19909305-19928803 Setaria italica
Seita.2G148500 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 19923804-19928803 Setaria italica
Seita.2G148500 5.0kb downstream 5.0kb downstream 19499 true scaffold_2: 19904305-19923803 Setaria italica
Seita.2G148500 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 19904305-19909304 Setaria italica
Seita.2G148500 10.0kb upstream 10.0kb upstream 24499 true scaffold_2: 19909305-19933803 Setaria italica
Seita.2G148500 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 19923804-19933803 Setaria italica
Seita.2G148500 10.0kb downstream 10.0kb downstream 24499 true scaffold_2: 19899305-19923803 Setaria italica
Seita.2G148500 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 19899305-19909304 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186858 5267 Panicoideae View MSA
124571087 5269 Grass View MSA
122046345 5273 Angiosperm View MSA
121351412 5274 Embryophyte View MSA
123427373 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.982       High
cufflinks 1.111       High
cufflinks 0.866        
cufflinks 0.827        
cufflinks 0.738        
cufflinks 1.145       High
cufflinks 0.835        
cufflinks 0.92        
cufflinks 0.898        
cufflinks 0.439       Low
cufflinks 0.88        
cufflinks 0.652        
cufflinks 0.737        
cufflinks 0.595        
cufflinks 0.678        
cufflinks 0.748        
cufflinks 0.562       Low
cufflinks 0.673        
cufflinks 0.534       Low
cufflinks 0.664        

0 Strain