Gene : Seita.2G152800 S. italica v2.2
Defline:  (1 of 2) PTHR23180:SF249 - ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD11-RELATED Genomic Order:  1528
Name:  ? Seita.2G152800 Secondary Identifier:  ? PAC:32719741
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G152800 0.5kb upstream 0.5kb upstream 4008 true scaffold_2: 21297883-21301890 Setaria italica
Seita.2G152800 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 21301391-21301890 Setaria italica
Seita.2G152800 0.5kb downstream 0.5kb downstream 4008 true scaffold_2: 21297383-21301390 Setaria italica
Seita.2G152800 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 21297383-21297882 Setaria italica
Seita.2G152800 1.0kb upstream 1.0kb upstream 4508 true scaffold_2: 21297883-21302390 Setaria italica
Seita.2G152800 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 21301391-21302390 Setaria italica
Seita.2G152800 1.0kb downstream 1.0kb downstream 4508 true scaffold_2: 21296883-21301390 Setaria italica
Seita.2G152800 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 21296883-21297882 Setaria italica
Seita.2G152800 2.0kb upstream 2.0kb upstream 5508 true scaffold_2: 21297883-21303390 Setaria italica
Seita.2G152800 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 21301391-21303390 Setaria italica
Seita.2G152800 2.0kb downstream 2.0kb downstream 5508 true scaffold_2: 21295883-21301390 Setaria italica
Seita.2G152800 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 21295883-21297882 Setaria italica
Seita.2G152800 5.0kb upstream 5.0kb upstream 8508 true scaffold_2: 21297883-21306390 Setaria italica
Seita.2G152800 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 21301391-21306390 Setaria italica
Seita.2G152800 5.0kb downstream 5.0kb downstream 8508 true scaffold_2: 21292883-21301390 Setaria italica
Seita.2G152800 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 21292883-21297882 Setaria italica
Seita.2G152800 10.0kb upstream 10.0kb upstream 13508 true scaffold_2: 21297883-21311390 Setaria italica
Seita.2G152800 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 21301391-21311390 Setaria italica
Seita.2G152800 10.0kb downstream 10.0kb downstream 13508 true scaffold_2: 21287883-21301390 Setaria italica
Seita.2G152800 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 21287883-21297882 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196785 5267 Panicoideae View MSA
124578196 5269 Grass View MSA
122045342 5273 Angiosperm View MSA
121310436 5274 Embryophyte View MSA
123347920 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.724       High
cufflinks 2.454        
cufflinks 1.613       Low
cufflinks 2.344        
cufflinks 4.187       High
cufflinks 2.468        
cufflinks 2.868        
cufflinks 2.456        
cufflinks 3.528        
cufflinks 4.549       High
cufflinks 3.551        
cufflinks 2.874        
cufflinks 2.834        
cufflinks 2.965        
cufflinks 3.654        
cufflinks 1.844       Low
cufflinks 3.122        
cufflinks 1.768       Low
cufflinks 2.126        
cufflinks 2.467        

0 Strain