Gene : Seita.2G153100 S. italica v2.2
Defline:  (1 of 1) PTHR10845 - REGULATOR OF G PROTEIN SIGNALING Genomic Order:  1531
Name:  ? Seita.2G153100 Secondary Identifier:  ? PAC:32719893
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G153100 0.5kb upstream 0.5kb upstream 10579 true scaffold_2: 21488234-21498812 Setaria italica
Seita.2G153100 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 21498313-21498812 Setaria italica
Seita.2G153100 0.5kb downstream 0.5kb downstream 10579 true scaffold_2: 21487734-21498312 Setaria italica
Seita.2G153100 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 21487734-21488233 Setaria italica
Seita.2G153100 1.0kb upstream 1.0kb upstream 11079 true scaffold_2: 21488234-21499312 Setaria italica
Seita.2G153100 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 21498313-21499312 Setaria italica
Seita.2G153100 1.0kb downstream 1.0kb downstream 11079 true scaffold_2: 21487234-21498312 Setaria italica
Seita.2G153100 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 21487234-21488233 Setaria italica
Seita.2G153100 2.0kb upstream 2.0kb upstream 12079 true scaffold_2: 21488234-21500312 Setaria italica
Seita.2G153100 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 21498313-21500312 Setaria italica
Seita.2G153100 2.0kb downstream 2.0kb downstream 12079 true scaffold_2: 21486234-21498312 Setaria italica
Seita.2G153100 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 21486234-21488233 Setaria italica
Seita.2G153100 5.0kb upstream 5.0kb upstream 15079 true scaffold_2: 21488234-21503312 Setaria italica
Seita.2G153100 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 21498313-21503312 Setaria italica
Seita.2G153100 5.0kb downstream 5.0kb downstream 15079 true scaffold_2: 21483234-21498312 Setaria italica
Seita.2G153100 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 21483234-21488233 Setaria italica
Seita.2G153100 10.0kb upstream 10.0kb upstream 20079 true scaffold_2: 21488234-21508312 Setaria italica
Seita.2G153100 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 21498313-21508312 Setaria italica
Seita.2G153100 10.0kb downstream 10.0kb downstream 20079 true scaffold_2: 21478234-21498312 Setaria italica
Seita.2G153100 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 21478234-21488233 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122064333 5267 Panicoideae View MSA
124363722 5269 Grass View MSA
122047614 5273 Angiosperm View MSA
121346241 5274 Embryophyte View MSA
123380356 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.178        
cufflinks 1.568       High
cufflinks 0.057     Low Low
cufflinks 0.065     Low Low
cufflinks 0.14        
cufflinks 1.503       High
cufflinks 0.758        
cufflinks 1.256        
cufflinks 0.545        
cufflinks 0.738        
cufflinks 1.017        
cufflinks 0.516        
cufflinks 0.37        
cufflinks 0.04     Low Low
cufflinks 0.71        
cufflinks 0.649        
cufflinks 0.763        
cufflinks 0.254        
cufflinks 0.027     Low Low
cufflinks 0.813        

0 Strain