Gene : Seita.2G154400 S. italica v2.2
Defline:  (1 of 1) PTHR23244//PTHR23244:SF276 - KELCH REPEAT DOMAIN Genomic Order:  1544
Name:  ? Seita.2G154400 Secondary Identifier:  ? PAC:32718887
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G154400 0.5kb upstream 0.5kb upstream 2890 true scaffold_2: 21920671-21923560 Setaria italica
Seita.2G154400 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 21920671-21921170 Setaria italica
Seita.2G154400 0.5kb downstream 0.5kb downstream 2890 true scaffold_2: 21921171-21924060 Setaria italica
Seita.2G154400 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 21923561-21924060 Setaria italica
Seita.2G154400 1.0kb upstream 1.0kb upstream 3390 true scaffold_2: 21920171-21923560 Setaria italica
Seita.2G154400 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 21920171-21921170 Setaria italica
Seita.2G154400 1.0kb downstream 1.0kb downstream 3390 true scaffold_2: 21921171-21924560 Setaria italica
Seita.2G154400 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 21923561-21924560 Setaria italica
Seita.2G154400 2.0kb upstream 2.0kb upstream 4390 true scaffold_2: 21919171-21923560 Setaria italica
Seita.2G154400 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 21919171-21921170 Setaria italica
Seita.2G154400 2.0kb downstream 2.0kb downstream 4390 true scaffold_2: 21921171-21925560 Setaria italica
Seita.2G154400 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 21923561-21925560 Setaria italica
Seita.2G154400 5.0kb upstream 5.0kb upstream 7390 true scaffold_2: 21916171-21923560 Setaria italica
Seita.2G154400 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 21916171-21921170 Setaria italica
Seita.2G154400 5.0kb downstream 5.0kb downstream 7390 true scaffold_2: 21921171-21928560 Setaria italica
Seita.2G154400 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 21923561-21928560 Setaria italica
Seita.2G154400 10.0kb upstream 10.0kb upstream 12390 true scaffold_2: 21911171-21923560 Setaria italica
Seita.2G154400 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 21911171-21921170 Setaria italica
Seita.2G154400 10.0kb downstream 10.0kb downstream 12390 true scaffold_2: 21921171-21933560 Setaria italica
Seita.2G154400 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 21923561-21933560 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184848 5267 Panicoideae View MSA
124578670 5269 Grass View MSA
122043366 5273 Angiosperm View MSA
121347303 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.478        
cufflinks 2.498        
cufflinks 0.133       Low
cufflinks 0.064     Low Low
cufflinks 0.359        
cufflinks 2.434        
cufflinks 2.033        
cufflinks 1.038        
cufflinks 1.519        
cufflinks 1.602        
cufflinks 1.157        
cufflinks 3.882        
cufflinks 2.961        
cufflinks 0.211       Low
cufflinks 2.746        
cufflinks 1.013        
cufflinks 3.477        
cufflinks 0.526        
cufflinks 0.036     Low Low
cufflinks 5.569       High

0 Strain