Gene : Seita.2G103600 S. italica v2.2
Defline:  (1 of 4) PF06522 - NADH-ubiquinone reductase complex 1 MLRQ subunit (B12D) Genomic Order:  1036
Name:  ? Seita.2G103600 Secondary Identifier:  ? PAC:32722161
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G103600 0.5kb upstream 0.5kb upstream 1500 true scaffold_2: 9837365-9838864 Setaria italica
Seita.2G103600 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 9837365-9837864 Setaria italica
Seita.2G103600 0.5kb downstream 0.5kb downstream 1500 true scaffold_2: 9837865-9839364 Setaria italica
Seita.2G103600 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 9838865-9839364 Setaria italica
Seita.2G103600 1.0kb upstream 1.0kb upstream 2000 true scaffold_2: 9836865-9838864 Setaria italica
Seita.2G103600 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 9836865-9837864 Setaria italica
Seita.2G103600 1.0kb downstream 1.0kb downstream 2000 true scaffold_2: 9837865-9839864 Setaria italica
Seita.2G103600 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 9838865-9839864 Setaria italica
Seita.2G103600 2.0kb upstream 2.0kb upstream 3000 true scaffold_2: 9835865-9838864 Setaria italica
Seita.2G103600 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 9835865-9837864 Setaria italica
Seita.2G103600 2.0kb downstream 2.0kb downstream 3000 true scaffold_2: 9837865-9840864 Setaria italica
Seita.2G103600 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 9838865-9840864 Setaria italica
Seita.2G103600 5.0kb upstream 5.0kb upstream 6000 true scaffold_2: 9832865-9838864 Setaria italica
Seita.2G103600 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 9832865-9837864 Setaria italica
Seita.2G103600 5.0kb downstream 5.0kb downstream 6000 true scaffold_2: 9837865-9843864 Setaria italica
Seita.2G103600 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 9838865-9843864 Setaria italica
Seita.2G103600 10.0kb upstream 10.0kb upstream 11000 true scaffold_2: 9827865-9838864 Setaria italica
Seita.2G103600 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 9827865-9837864 Setaria italica
Seita.2G103600 10.0kb downstream 10.0kb downstream 11000 true scaffold_2: 9837865-9848864 Setaria italica
Seita.2G103600 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 9838865-9848864 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195935 5267 Panicoideae View MSA
124574225 5269 Grass View MSA
122049725 5273 Angiosperm View MSA
121344537 5274 Embryophyte View MSA
123428390 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.971        
cufflinks 7.846       Low
cufflinks 9.818        
cufflinks 9.755        
cufflinks 12.709     High  
cufflinks 7.311       Low
cufflinks 4.891       Low
cufflinks 25.608     High  
cufflinks 13.747     High  
cufflinks 68.366     High High
cufflinks 48.842     High  
cufflinks 46.73     High  
cufflinks 49.126     High  
cufflinks 49.713     High  
cufflinks 43.77     High  
cufflinks 2.728       Low
cufflinks 65.739     High High
cufflinks 23.459     High  
cufflinks 38.928     High  
cufflinks 58.095     High High

0 Strain