Gene : Seita.2G117200 S. italica v2.2
Defline:  (1 of 1) PTHR22884:SF95 - HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH7-RELATED Genomic Order:  1172
Name:  ? Seita.2G117200 Secondary Identifier:  ? PAC:32720282
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G117200 0.5kb upstream 0.5kb upstream 6135 true scaffold_2: 11908898-11915032 Setaria italica
Seita.2G117200 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11908898-11909397 Setaria italica
Seita.2G117200 0.5kb downstream 0.5kb downstream 6135 true scaffold_2: 11909398-11915532 Setaria italica
Seita.2G117200 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11915033-11915532 Setaria italica
Seita.2G117200 1.0kb upstream 1.0kb upstream 6635 true scaffold_2: 11908398-11915032 Setaria italica
Seita.2G117200 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11908398-11909397 Setaria italica
Seita.2G117200 1.0kb downstream 1.0kb downstream 6635 true scaffold_2: 11909398-11916032 Setaria italica
Seita.2G117200 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11915033-11916032 Setaria italica
Seita.2G117200 2.0kb upstream 2.0kb upstream 7635 true scaffold_2: 11907398-11915032 Setaria italica
Seita.2G117200 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11907398-11909397 Setaria italica
Seita.2G117200 2.0kb downstream 2.0kb downstream 7635 true scaffold_2: 11909398-11917032 Setaria italica
Seita.2G117200 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11915033-11917032 Setaria italica
Seita.2G117200 5.0kb upstream 5.0kb upstream 10635 true scaffold_2: 11904398-11915032 Setaria italica
Seita.2G117200 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11904398-11909397 Setaria italica
Seita.2G117200 5.0kb downstream 5.0kb downstream 10635 true scaffold_2: 11909398-11920032 Setaria italica
Seita.2G117200 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11915033-11920032 Setaria italica
Seita.2G117200 10.0kb upstream 10.0kb upstream 15635 true scaffold_2: 11899398-11915032 Setaria italica
Seita.2G117200 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11899398-11909397 Setaria italica
Seita.2G117200 10.0kb downstream 10.0kb downstream 15635 true scaffold_2: 11909398-11925032 Setaria italica
Seita.2G117200 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11915033-11925032 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179503 5267 Panicoideae View MSA
124573267 5269 Grass View MSA
122047212 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121310709 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.95        
cufflinks 9.686        
cufflinks 7.466        
cufflinks 6.293        
cufflinks 5.629       Low
cufflinks 10.76       High
cufflinks 7.324        
cufflinks 6.173        
cufflinks 4.217       Low
cufflinks 8.213        
cufflinks 9.239        
cufflinks 10.241        
cufflinks 8.901        
cufflinks 6.003       Low
cufflinks 12.993       High
cufflinks 7.657        
cufflinks 11.989       High
cufflinks 7.642        
cufflinks 6.288        
cufflinks 10.083        

0 Strain