Gene : Seita.2G209800 S. italica v2.2
Defline:  (1 of 19) 5.3.4.1 - Protein disulfide-isomerase / S-S rearrangase Genomic Order:  2098
Name:  ? Seita.2G209800 Secondary Identifier:  ? PAC:32721146
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G209800 0.5kb upstream 0.5kb upstream 5941 true scaffold_2: 31169867-31175807 Setaria italica
Seita.2G209800 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 31169867-31170366 Setaria italica
Seita.2G209800 0.5kb downstream 0.5kb downstream 5941 true scaffold_2: 31170367-31176307 Setaria italica
Seita.2G209800 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 31175808-31176307 Setaria italica
Seita.2G209800 1.0kb upstream 1.0kb upstream 6441 true scaffold_2: 31169367-31175807 Setaria italica
Seita.2G209800 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 31169367-31170366 Setaria italica
Seita.2G209800 1.0kb downstream 1.0kb downstream 6441 true scaffold_2: 31170367-31176807 Setaria italica
Seita.2G209800 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 31175808-31176807 Setaria italica
Seita.2G209800 2.0kb upstream 2.0kb upstream 7441 true scaffold_2: 31168367-31175807 Setaria italica
Seita.2G209800 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 31168367-31170366 Setaria italica
Seita.2G209800 2.0kb downstream 2.0kb downstream 7441 true scaffold_2: 31170367-31177807 Setaria italica
Seita.2G209800 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 31175808-31177807 Setaria italica
Seita.2G209800 5.0kb upstream 5.0kb upstream 10441 true scaffold_2: 31165367-31175807 Setaria italica
Seita.2G209800 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 31165367-31170366 Setaria italica
Seita.2G209800 5.0kb downstream 5.0kb downstream 10441 true scaffold_2: 31170367-31180807 Setaria italica
Seita.2G209800 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 31175808-31180807 Setaria italica
Seita.2G209800 10.0kb upstream 10.0kb upstream 15441 true scaffold_2: 31160367-31175807 Setaria italica
Seita.2G209800 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 31160367-31170366 Setaria italica
Seita.2G209800 10.0kb downstream 10.0kb downstream 15441 true scaffold_2: 31170367-31185807 Setaria italica
Seita.2G209800 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 31175808-31185807 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184049 5267 Panicoideae View MSA
124586090 5269 Grass View MSA
122047663 5273 Angiosperm View MSA
121346624 5274 Embryophyte View MSA
123425591 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.526        
cufflinks 0.726        
cufflinks 8.273       High
cufflinks 9.713       High
cufflinks 9.607       High
cufflinks 0.609        
cufflinks 2.293        
cufflinks 11.09       High
cufflinks 2.662        
cufflinks 1.131        
cufflinks 0.407       Low
cufflinks 0.526        
cufflinks 0.478        
cufflinks 5.533        
cufflinks 0.459       Low
cufflinks 3.931        
cufflinks 0.616        
cufflinks 0.814        
cufflinks 16.758     High High
cufflinks 0.484        

0 Strain