Gene : Seita.2G226700 S. italica v2.2
Defline:  (1 of 1) PTHR10502//PTHR10502:SF127 - ANNEXIN Genomic Order:  2267
Name:  ? Seita.2G226700 Secondary Identifier:  ? PAC:32718048
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G226700 0.5kb upstream 0.5kb upstream 2676 true scaffold_2: 32874902-32877577 Setaria italica
Seita.2G226700 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 32877078-32877577 Setaria italica
Seita.2G226700 0.5kb downstream 0.5kb downstream 2676 true scaffold_2: 32874402-32877077 Setaria italica
Seita.2G226700 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 32874402-32874901 Setaria italica
Seita.2G226700 1.0kb upstream 1.0kb upstream 3176 true scaffold_2: 32874902-32878077 Setaria italica
Seita.2G226700 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 32877078-32878077 Setaria italica
Seita.2G226700 1.0kb downstream 1.0kb downstream 3176 true scaffold_2: 32873902-32877077 Setaria italica
Seita.2G226700 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 32873902-32874901 Setaria italica
Seita.2G226700 2.0kb upstream 2.0kb upstream 4176 true scaffold_2: 32874902-32879077 Setaria italica
Seita.2G226700 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 32877078-32879077 Setaria italica
Seita.2G226700 2.0kb downstream 2.0kb downstream 4176 true scaffold_2: 32872902-32877077 Setaria italica
Seita.2G226700 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 32872902-32874901 Setaria italica
Seita.2G226700 5.0kb upstream 5.0kb upstream 7176 true scaffold_2: 32874902-32882077 Setaria italica
Seita.2G226700 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 32877078-32882077 Setaria italica
Seita.2G226700 5.0kb downstream 5.0kb downstream 7176 true scaffold_2: 32869902-32877077 Setaria italica
Seita.2G226700 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 32869902-32874901 Setaria italica
Seita.2G226700 10.0kb upstream 10.0kb upstream 12176 true scaffold_2: 32874902-32887077 Setaria italica
Seita.2G226700 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 32877078-32887077 Setaria italica
Seita.2G226700 10.0kb downstream 10.0kb downstream 12176 true scaffold_2: 32864902-32877077 Setaria italica
Seita.2G226700 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 32864902-32874901 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189364 5267 Panicoideae View MSA
124570097 5269 Grass View MSA
122049113 5273 Angiosperm View MSA
121311253 5274 Embryophyte View MSA
123348570 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.084        
cufflinks 3.321       High
cufflinks 0.253       Low
cufflinks 0.38       Low
cufflinks 0.776        
cufflinks 3.551       High
cufflinks 0.507        
cufflinks 1.844        
cufflinks 0.952        
cufflinks 2.709        
cufflinks 1.088        
cufflinks 3.165       High
cufflinks 3.108       High
cufflinks 0.683        
cufflinks 1.463        
cufflinks 0.312       Low
cufflinks 5.921       High
cufflinks 1.014        
cufflinks 0.309       Low
cufflinks 2.082        

0 Strain