Gene : Seita.2G234400 S. italica v2.2
Defline:  (1 of 1) PTHR11802//PTHR11802:SF92 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE Genomic Order:  2344
Name:  ? Seita.2G234400 Secondary Identifier:  ? PAC:32720949
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G234400 0.5kb upstream 0.5kb upstream 2856 true scaffold_2: 33669152-33672007 Setaria italica
Seita.2G234400 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 33671508-33672007 Setaria italica
Seita.2G234400 0.5kb downstream 0.5kb downstream 2856 true scaffold_2: 33668652-33671507 Setaria italica
Seita.2G234400 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 33668652-33669151 Setaria italica
Seita.2G234400 1.0kb upstream 1.0kb upstream 3356 true scaffold_2: 33669152-33672507 Setaria italica
Seita.2G234400 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 33671508-33672507 Setaria italica
Seita.2G234400 1.0kb downstream 1.0kb downstream 3356 true scaffold_2: 33668152-33671507 Setaria italica
Seita.2G234400 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 33668152-33669151 Setaria italica
Seita.2G234400 2.0kb upstream 2.0kb upstream 4356 true scaffold_2: 33669152-33673507 Setaria italica
Seita.2G234400 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 33671508-33673507 Setaria italica
Seita.2G234400 2.0kb downstream 2.0kb downstream 4356 true scaffold_2: 33667152-33671507 Setaria italica
Seita.2G234400 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 33667152-33669151 Setaria italica
Seita.2G234400 5.0kb upstream 5.0kb upstream 7356 true scaffold_2: 33669152-33676507 Setaria italica
Seita.2G234400 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 33671508-33676507 Setaria italica
Seita.2G234400 5.0kb downstream 5.0kb downstream 7356 true scaffold_2: 33664152-33671507 Setaria italica
Seita.2G234400 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 33664152-33669151 Setaria italica
Seita.2G234400 10.0kb upstream 10.0kb upstream 12356 true scaffold_2: 33669152-33681507 Setaria italica
Seita.2G234400 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 33671508-33681507 Setaria italica
Seita.2G234400 10.0kb downstream 10.0kb downstream 12356 true scaffold_2: 33659152-33671507 Setaria italica
Seita.2G234400 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 33659152-33669151 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198825 5267 Panicoideae View MSA
124589215 5269 Grass View MSA
122048789 5273 Angiosperm View MSA
121311114 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.14     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.196       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.085     Low  
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.093     Low  

0 Strain