Gene : Seita.2G304800 S. italica v2.2
Defline:  (1 of 1) PTHR31376:SF10 - PURINE PERMEASE 5-RELATED Genomic Order:  3048
Name:  ? Seita.2G304800 Secondary Identifier:  ? PAC:32723306
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G304800 0.5kb upstream 0.5kb upstream 3384 true scaffold_2: 39756491-39759874 Setaria italica
Seita.2G304800 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 39759375-39759874 Setaria italica
Seita.2G304800 0.5kb downstream 0.5kb downstream 3384 true scaffold_2: 39755991-39759374 Setaria italica
Seita.2G304800 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 39755991-39756490 Setaria italica
Seita.2G304800 1.0kb upstream 1.0kb upstream 3884 true scaffold_2: 39756491-39760374 Setaria italica
Seita.2G304800 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 39759375-39760374 Setaria italica
Seita.2G304800 1.0kb downstream 1.0kb downstream 3884 true scaffold_2: 39755491-39759374 Setaria italica
Seita.2G304800 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 39755491-39756490 Setaria italica
Seita.2G304800 2.0kb upstream 2.0kb upstream 4884 true scaffold_2: 39756491-39761374 Setaria italica
Seita.2G304800 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 39759375-39761374 Setaria italica
Seita.2G304800 2.0kb downstream 2.0kb downstream 4884 true scaffold_2: 39754491-39759374 Setaria italica
Seita.2G304800 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 39754491-39756490 Setaria italica
Seita.2G304800 5.0kb upstream 5.0kb upstream 7884 true scaffold_2: 39756491-39764374 Setaria italica
Seita.2G304800 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 39759375-39764374 Setaria italica
Seita.2G304800 5.0kb downstream 5.0kb downstream 7884 true scaffold_2: 39751491-39759374 Setaria italica
Seita.2G304800 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 39751491-39756490 Setaria italica
Seita.2G304800 10.0kb upstream 10.0kb upstream 12884 true scaffold_2: 39756491-39769374 Setaria italica
Seita.2G304800 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 39759375-39769374 Setaria italica
Seita.2G304800 10.0kb downstream 10.0kb downstream 12884 true scaffold_2: 39746491-39759374 Setaria italica
Seita.2G304800 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 39746491-39756490 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177120 5267 Panicoideae View MSA
124572522 5269 Grass View MSA
122045896 5273 Angiosperm View MSA
121310524 5274 Embryophyte View MSA
123347985 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.16       Low
cufflinks 0.788       High
cufflinks 0.379        
cufflinks 0.453        
cufflinks 0.429        
cufflinks 0.356        
cufflinks 0.715       High
cufflinks 0.242        
cufflinks 0.398        
cufflinks 0.923       High
cufflinks 0.54        
cufflinks 0.137       Low
cufflinks 0.731       High
cufflinks 0.446        
cufflinks 0.696        
cufflinks 0.286        
cufflinks 0.144       Low
cufflinks 0.086     Low Low
cufflinks 0.456        
cufflinks 0.382        

0 Strain