Gene : Seita.2G263900 S. italica v2.2
Defline:  (1 of 1) PTHR10026:SF7 - CYCLIN-C Genomic Order:  2639
Name:  ? Seita.2G263900 Secondary Identifier:  ? PAC:32720841
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G263900 0.5kb upstream 0.5kb upstream 5565 true scaffold_2: 36544621-36550185 Setaria italica
Seita.2G263900 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 36544621-36545120 Setaria italica
Seita.2G263900 0.5kb downstream 0.5kb downstream 5565 true scaffold_2: 36545121-36550685 Setaria italica
Seita.2G263900 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 36550186-36550685 Setaria italica
Seita.2G263900 1.0kb upstream 1.0kb upstream 6065 true scaffold_2: 36544121-36550185 Setaria italica
Seita.2G263900 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 36544121-36545120 Setaria italica
Seita.2G263900 1.0kb downstream 1.0kb downstream 6065 true scaffold_2: 36545121-36551185 Setaria italica
Seita.2G263900 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 36550186-36551185 Setaria italica
Seita.2G263900 2.0kb upstream 2.0kb upstream 7065 true scaffold_2: 36543121-36550185 Setaria italica
Seita.2G263900 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 36543121-36545120 Setaria italica
Seita.2G263900 2.0kb downstream 2.0kb downstream 7065 true scaffold_2: 36545121-36552185 Setaria italica
Seita.2G263900 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 36550186-36552185 Setaria italica
Seita.2G263900 5.0kb upstream 5.0kb upstream 10065 true scaffold_2: 36540121-36550185 Setaria italica
Seita.2G263900 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 36540121-36545120 Setaria italica
Seita.2G263900 5.0kb downstream 5.0kb downstream 10065 true scaffold_2: 36545121-36555185 Setaria italica
Seita.2G263900 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 36550186-36555185 Setaria italica
Seita.2G263900 10.0kb upstream 10.0kb upstream 15065 true scaffold_2: 36535121-36550185 Setaria italica
Seita.2G263900 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 36535121-36545120 Setaria italica
Seita.2G263900 10.0kb downstream 10.0kb downstream 15065 true scaffold_2: 36545121-36560185 Setaria italica
Seita.2G263900 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 36550186-36560185 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182402 5267 Panicoideae View MSA
124570436 5269 Grass View MSA
122042556 5273 Angiosperm View MSA
123429117 5275 Viridiplantae View MSA
121346319 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.38        
cufflinks 7.221        
cufflinks 9.089        
cufflinks 11.097     High High
cufflinks 8.531        
cufflinks 8.794        
cufflinks 7.931        
cufflinks 9.061        
cufflinks 7.211        
cufflinks 11.604       High
cufflinks 7.002        
cufflinks 7.968        
cufflinks 10.927       High
cufflinks 5.498       Low
cufflinks 6.972        
cufflinks 9.672        
cufflinks 9.592        
cufflinks 7.02        
cufflinks 6.881        
cufflinks 7.178        

0 Strain