Gene : Seita.2G273300 S. italica v2.2
Defline:  (1 of 1) KOG3118 - Disrupter of silencing SAS10 Genomic Order:  2733
Name:  ? Seita.2G273300 Secondary Identifier:  ? PAC:32720368
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G273300 0.5kb upstream 0.5kb upstream 9095 true scaffold_2: 37273894-37282988 Setaria italica
Seita.2G273300 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 37282489-37282988 Setaria italica
Seita.2G273300 0.5kb downstream 0.5kb downstream 9095 true scaffold_2: 37273394-37282488 Setaria italica
Seita.2G273300 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 37273394-37273893 Setaria italica
Seita.2G273300 1.0kb upstream 1.0kb upstream 9595 true scaffold_2: 37273894-37283488 Setaria italica
Seita.2G273300 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 37282489-37283488 Setaria italica
Seita.2G273300 1.0kb downstream 1.0kb downstream 9595 true scaffold_2: 37272894-37282488 Setaria italica
Seita.2G273300 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 37272894-37273893 Setaria italica
Seita.2G273300 2.0kb upstream 2.0kb upstream 10595 true scaffold_2: 37273894-37284488 Setaria italica
Seita.2G273300 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 37282489-37284488 Setaria italica
Seita.2G273300 2.0kb downstream 2.0kb downstream 10595 true scaffold_2: 37271894-37282488 Setaria italica
Seita.2G273300 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 37271894-37273893 Setaria italica
Seita.2G273300 5.0kb upstream 5.0kb upstream 13595 true scaffold_2: 37273894-37287488 Setaria italica
Seita.2G273300 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 37282489-37287488 Setaria italica
Seita.2G273300 5.0kb downstream 5.0kb downstream 13595 true scaffold_2: 37268894-37282488 Setaria italica
Seita.2G273300 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 37268894-37273893 Setaria italica
Seita.2G273300 10.0kb upstream 10.0kb upstream 18595 true scaffold_2: 37273894-37292488 Setaria italica
Seita.2G273300 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 37282489-37292488 Setaria italica
Seita.2G273300 10.0kb downstream 10.0kb downstream 18595 true scaffold_2: 37263894-37282488 Setaria italica
Seita.2G273300 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 37263894-37273893 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027842 5273 Angiosperm View MSA
122180248 5267 Panicoideae View MSA
124576572 5269 Grass View MSA
121344490 5274 Embryophyte View MSA
123424280 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.675        
cufflinks 0.992       High
cufflinks 0.516        
cufflinks 0.379       Low
cufflinks 0.446        
cufflinks 1.017       High
cufflinks 0.606        
cufflinks 0.782        
cufflinks 0.925       High
cufflinks 0.243     Low Low
cufflinks 0.644        
cufflinks 0.789        
cufflinks 0.409       Low
cufflinks 0.759        
cufflinks 0.85        
cufflinks 0.518        
cufflinks 0.834        
cufflinks 0.787        
cufflinks 0.368       Low
cufflinks 0.74        

0 Strain