Gene : Seita.2G356400 S. italica v2.2
Defline:  (1 of 1) PTHR12042//PTHR12042:SF13 - LACTOSYLCERAMIDE 4-ALPHA-GALACTOSYLTRANSFERASE ALPHA- 1,4-GALACTOSYLTRANSFERASE Genomic Order:  3564
Name:  ? Seita.2G356400 Secondary Identifier:  ? PAC:32721143
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G356400 0.5kb upstream 0.5kb upstream 5792 true scaffold_2: 43545751-43551542 Setaria italica
Seita.2G356400 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 43551043-43551542 Setaria italica
Seita.2G356400 0.5kb downstream 0.5kb downstream 5792 true scaffold_2: 43545251-43551042 Setaria italica
Seita.2G356400 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 43545251-43545750 Setaria italica
Seita.2G356400 1.0kb upstream 1.0kb upstream 6292 true scaffold_2: 43545751-43552042 Setaria italica
Seita.2G356400 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 43551043-43552042 Setaria italica
Seita.2G356400 1.0kb downstream 1.0kb downstream 6292 true scaffold_2: 43544751-43551042 Setaria italica
Seita.2G356400 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 43544751-43545750 Setaria italica
Seita.2G356400 2.0kb upstream 2.0kb upstream 7292 true scaffold_2: 43545751-43553042 Setaria italica
Seita.2G356400 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 43551043-43553042 Setaria italica
Seita.2G356400 2.0kb downstream 2.0kb downstream 7292 true scaffold_2: 43543751-43551042 Setaria italica
Seita.2G356400 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 43543751-43545750 Setaria italica
Seita.2G356400 5.0kb upstream 5.0kb upstream 10292 true scaffold_2: 43545751-43556042 Setaria italica
Seita.2G356400 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 43551043-43556042 Setaria italica
Seita.2G356400 5.0kb downstream 5.0kb downstream 10292 true scaffold_2: 43540751-43551042 Setaria italica
Seita.2G356400 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 43540751-43545750 Setaria italica
Seita.2G356400 10.0kb upstream 10.0kb upstream 15292 true scaffold_2: 43545751-43561042 Setaria italica
Seita.2G356400 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 43551043-43561042 Setaria italica
Seita.2G356400 10.0kb downstream 10.0kb downstream 15292 true scaffold_2: 43535751-43551042 Setaria italica
Seita.2G356400 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 43535751-43545750 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191104 5267 Panicoideae View MSA
124570361 5269 Grass View MSA
122048319 5273 Angiosperm View MSA
121348346 5274 Embryophyte View MSA
123380826 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.598        
cufflinks 10.366        
cufflinks 5.597        
cufflinks 5.714        
cufflinks 5.284        
cufflinks 12.751       High
cufflinks 6.323        
cufflinks 8.705        
cufflinks 4.743       Low
cufflinks 6.065        
cufflinks 8.514        
cufflinks 11.902       High
cufflinks 11.047       High
cufflinks 6.109        
cufflinks 11.801       High
cufflinks 3.992       Low
cufflinks 9.119        
cufflinks 4.558       Low
cufflinks 5.741        
cufflinks 12.616       High

0 Strain