Gene : Seita.2G373800 S. italica v2.2
Defline:  (1 of 1) PTHR21314:SF0 - UPF0553 PROTEIN C9ORF64 Genomic Order:  3738
Name:  ? Seita.2G373800 Secondary Identifier:  ? PAC:32720075
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G373800 0.5kb upstream 0.5kb upstream 5136 true scaffold_2: 44688644-44693779 Setaria italica
Seita.2G373800 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 44688644-44689143 Setaria italica
Seita.2G373800 0.5kb downstream 0.5kb downstream 5136 true scaffold_2: 44689144-44694279 Setaria italica
Seita.2G373800 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 44693780-44694279 Setaria italica
Seita.2G373800 1.0kb upstream 1.0kb upstream 5636 true scaffold_2: 44688144-44693779 Setaria italica
Seita.2G373800 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 44688144-44689143 Setaria italica
Seita.2G373800 1.0kb downstream 1.0kb downstream 5636 true scaffold_2: 44689144-44694779 Setaria italica
Seita.2G373800 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 44693780-44694779 Setaria italica
Seita.2G373800 2.0kb upstream 2.0kb upstream 6636 true scaffold_2: 44687144-44693779 Setaria italica
Seita.2G373800 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 44687144-44689143 Setaria italica
Seita.2G373800 2.0kb downstream 2.0kb downstream 6636 true scaffold_2: 44689144-44695779 Setaria italica
Seita.2G373800 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 44693780-44695779 Setaria italica
Seita.2G373800 5.0kb upstream 5.0kb upstream 9636 true scaffold_2: 44684144-44693779 Setaria italica
Seita.2G373800 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 44684144-44689143 Setaria italica
Seita.2G373800 5.0kb downstream 5.0kb downstream 9636 true scaffold_2: 44689144-44698779 Setaria italica
Seita.2G373800 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 44693780-44698779 Setaria italica
Seita.2G373800 10.0kb upstream 10.0kb upstream 14636 true scaffold_2: 44679144-44693779 Setaria italica
Seita.2G373800 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 44679144-44689143 Setaria italica
Seita.2G373800 10.0kb downstream 10.0kb downstream 14636 true scaffold_2: 44689144-44703779 Setaria italica
Seita.2G373800 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 44693780-44703779 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175834 5267 Panicoideae View MSA
124582702 5269 Grass View MSA
122048860 5273 Angiosperm View MSA
121348381 5274 Embryophyte View MSA
123425708 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.894        
cufflinks 1.81        
cufflinks 0.808        
cufflinks 0.181       Low
cufflinks 0.699       Low
cufflinks 2.282        
cufflinks 5.704       High
cufflinks 3.938        
cufflinks 4.161        
cufflinks 1.748        
cufflinks 1.857        
cufflinks 1.249        
cufflinks 0.476       Low
cufflinks 5.514       High
cufflinks 2.274        
cufflinks 9.215       High
cufflinks 1.942        
cufflinks 5.975       High
cufflinks 1.203        
cufflinks 1.691        

0 Strain