Gene : Seita.2G375600 S. italica v2.2
Genomic Order:  3756 Name:  ? Seita.2G375600
Secondary Identifier:  ? PAC:32723352
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G375600 0.5kb upstream 0.5kb upstream 1801 true scaffold_2: 44818016-44819816 Setaria italica
Seita.2G375600 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 44819317-44819816 Setaria italica
Seita.2G375600 0.5kb downstream 0.5kb downstream 1801 true scaffold_2: 44817516-44819316 Setaria italica
Seita.2G375600 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 44817516-44818015 Setaria italica
Seita.2G375600 1.0kb upstream 1.0kb upstream 2301 true scaffold_2: 44818016-44820316 Setaria italica
Seita.2G375600 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 44819317-44820316 Setaria italica
Seita.2G375600 1.0kb downstream 1.0kb downstream 2301 true scaffold_2: 44817016-44819316 Setaria italica
Seita.2G375600 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 44817016-44818015 Setaria italica
Seita.2G375600 2.0kb upstream 2.0kb upstream 3301 true scaffold_2: 44818016-44821316 Setaria italica
Seita.2G375600 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 44819317-44821316 Setaria italica
Seita.2G375600 2.0kb downstream 2.0kb downstream 3301 true scaffold_2: 44816016-44819316 Setaria italica
Seita.2G375600 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 44816016-44818015 Setaria italica
Seita.2G375600 5.0kb upstream 5.0kb upstream 6301 true scaffold_2: 44818016-44824316 Setaria italica
Seita.2G375600 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 44819317-44824316 Setaria italica
Seita.2G375600 5.0kb downstream 5.0kb downstream 6301 true scaffold_2: 44813016-44819316 Setaria italica
Seita.2G375600 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 44813016-44818015 Setaria italica
Seita.2G375600 10.0kb upstream 10.0kb upstream 11301 true scaffold_2: 44818016-44829316 Setaria italica
Seita.2G375600 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 44819317-44829316 Setaria italica
Seita.2G375600 10.0kb downstream 10.0kb downstream 11301 true scaffold_2: 44808016-44819316 Setaria italica
Seita.2G375600 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 44808016-44818015 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028150 5273 Angiosperm View MSA
122190988 5267 Panicoideae View MSA
124584177 5269 Grass View MSA
121344480 5274 Embryophyte View MSA
123428462 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.188        
cufflinks 0.759       High
cufflinks 0.042     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.058     Low Low
cufflinks 0.685       High
cufflinks 0.207        
cufflinks 0.253        
cufflinks 0.215        
cufflinks 0.425        
cufflinks 0.157        
cufflinks 0.203        
cufflinks 0.333        
cufflinks 0.241        
cufflinks 0.562        
cufflinks 0.156        
cufflinks 0.535        
cufflinks 0.048     Low Low
cufflinks 0.015     Low Low
cufflinks 0.588       High

0 Strain