Gene : Seita.2G377300 S. italica v2.2
Defline:  (1 of 1) KOG2733 - Uncharacterized membrane protein Genomic Order:  3773
Name:  ? Seita.2G377300 Secondary Identifier:  ? PAC:32717994
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G377300 0.5kb upstream 0.5kb upstream 8106 true scaffold_2: 44907153-44915258 Setaria italica
Seita.2G377300 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 44907153-44907652 Setaria italica
Seita.2G377300 0.5kb downstream 0.5kb downstream 8106 true scaffold_2: 44907653-44915758 Setaria italica
Seita.2G377300 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 44915259-44915758 Setaria italica
Seita.2G377300 1.0kb upstream 1.0kb upstream 8606 true scaffold_2: 44906653-44915258 Setaria italica
Seita.2G377300 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 44906653-44907652 Setaria italica
Seita.2G377300 1.0kb downstream 1.0kb downstream 8606 true scaffold_2: 44907653-44916258 Setaria italica
Seita.2G377300 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 44915259-44916258 Setaria italica
Seita.2G377300 2.0kb upstream 2.0kb upstream 9606 true scaffold_2: 44905653-44915258 Setaria italica
Seita.2G377300 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 44905653-44907652 Setaria italica
Seita.2G377300 2.0kb downstream 2.0kb downstream 9606 true scaffold_2: 44907653-44917258 Setaria italica
Seita.2G377300 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 44915259-44917258 Setaria italica
Seita.2G377300 5.0kb upstream 5.0kb upstream 12606 true scaffold_2: 44902653-44915258 Setaria italica
Seita.2G377300 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 44902653-44907652 Setaria italica
Seita.2G377300 5.0kb downstream 5.0kb downstream 12606 true scaffold_2: 44907653-44920258 Setaria italica
Seita.2G377300 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 44915259-44920258 Setaria italica
Seita.2G377300 10.0kb upstream 10.0kb upstream 17606 true scaffold_2: 44897653-44915258 Setaria italica
Seita.2G377300 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 44897653-44907652 Setaria italica
Seita.2G377300 10.0kb downstream 10.0kb downstream 17606 true scaffold_2: 44907653-44925258 Setaria italica
Seita.2G377300 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 44915259-44925258 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196353 5267 Panicoideae View MSA
124581973 5269 Grass View MSA
122043116 5273 Angiosperm View MSA
123428910 5275 Viridiplantae View MSA
121350997 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.593        
cufflinks 5.213       High
cufflinks 2.055        
cufflinks 1.56       Low
cufflinks 1.93        
cufflinks 4.521       High
cufflinks 2.537        
cufflinks 3.223        
cufflinks 1.492       Low
cufflinks 3.703       High
cufflinks 3.054        
cufflinks 2.633        
cufflinks 2.705        
cufflinks 2.904        
cufflinks 2.548        
cufflinks 1.849       Low
cufflinks 3.585        
cufflinks 2.358        
cufflinks 2.103        
cufflinks 2.949        

0 Strain