Gene : Seita.2G393300 S. italica v2.2
Defline:  (1 of 2) PTHR11711//PTHR11711:SF187 - ADP RIBOSYLATION FACTOR-RELATED Genomic Order:  3933
Name:  ? Seita.2G393300 Secondary Identifier:  ? PAC:32720326
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G393300 0.5kb upstream 0.5kb upstream 3735 true scaffold_2: 45866596-45870330 Setaria italica
Seita.2G393300 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 45869831-45870330 Setaria italica
Seita.2G393300 0.5kb downstream 0.5kb downstream 3735 true scaffold_2: 45866096-45869830 Setaria italica
Seita.2G393300 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 45866096-45866595 Setaria italica
Seita.2G393300 1.0kb upstream 1.0kb upstream 4235 true scaffold_2: 45866596-45870830 Setaria italica
Seita.2G393300 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 45869831-45870830 Setaria italica
Seita.2G393300 1.0kb downstream 1.0kb downstream 4235 true scaffold_2: 45865596-45869830 Setaria italica
Seita.2G393300 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 45865596-45866595 Setaria italica
Seita.2G393300 2.0kb upstream 2.0kb upstream 5235 true scaffold_2: 45866596-45871830 Setaria italica
Seita.2G393300 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 45869831-45871830 Setaria italica
Seita.2G393300 2.0kb downstream 2.0kb downstream 5235 true scaffold_2: 45864596-45869830 Setaria italica
Seita.2G393300 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 45864596-45866595 Setaria italica
Seita.2G393300 5.0kb upstream 5.0kb upstream 8235 true scaffold_2: 45866596-45874830 Setaria italica
Seita.2G393300 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 45869831-45874830 Setaria italica
Seita.2G393300 5.0kb downstream 5.0kb downstream 8235 true scaffold_2: 45861596-45869830 Setaria italica
Seita.2G393300 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 45861596-45866595 Setaria italica
Seita.2G393300 10.0kb upstream 10.0kb upstream 13235 true scaffold_2: 45866596-45879830 Setaria italica
Seita.2G393300 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 45869831-45879830 Setaria italica
Seita.2G393300 10.0kb downstream 10.0kb downstream 13235 true scaffold_2: 45856596-45869830 Setaria italica
Seita.2G393300 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 45856596-45866595 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191519 5267 Panicoideae View MSA
124584007 5269 Grass View MSA
122045512 5273 Angiosperm View MSA
121347621 5274 Embryophyte View MSA
123424811 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.706        
cufflinks 9.286        
cufflinks 5.347       Low
cufflinks 6.582        
cufflinks 5.565       Low
cufflinks 9.008        
cufflinks 5.495       Low
cufflinks 7.09        
cufflinks 5.627       Low
cufflinks 5.695        
cufflinks 7.134        
cufflinks 13.811     High High
cufflinks 11.432       High
cufflinks 6.694        
cufflinks 11.342       High
cufflinks 5.218       Low
cufflinks 9.5        
cufflinks 8.616        
cufflinks 7.208        
cufflinks 11.254       High

0 Strain