Gene : Seita.2G336000 S. italica v2.2
Defline:  (1 of 1) PTHR10984:SF37 - CELL REDOX HOMEOSTASIS PROTEIN-RELATED Genomic Order:  3360
Name:  ? Seita.2G336000 Secondary Identifier:  ? PAC:32721218
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G336000 0.5kb upstream 0.5kb upstream 6784 true scaffold_2: 42026202-42032985 Setaria italica
Seita.2G336000 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 42026202-42026701 Setaria italica
Seita.2G336000 0.5kb downstream 0.5kb downstream 6784 true scaffold_2: 42026702-42033485 Setaria italica
Seita.2G336000 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 42032986-42033485 Setaria italica
Seita.2G336000 1.0kb upstream 1.0kb upstream 7284 true scaffold_2: 42025702-42032985 Setaria italica
Seita.2G336000 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 42025702-42026701 Setaria italica
Seita.2G336000 1.0kb downstream 1.0kb downstream 7284 true scaffold_2: 42026702-42033985 Setaria italica
Seita.2G336000 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 42032986-42033985 Setaria italica
Seita.2G336000 2.0kb upstream 2.0kb upstream 8284 true scaffold_2: 42024702-42032985 Setaria italica
Seita.2G336000 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 42024702-42026701 Setaria italica
Seita.2G336000 2.0kb downstream 2.0kb downstream 8284 true scaffold_2: 42026702-42034985 Setaria italica
Seita.2G336000 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 42032986-42034985 Setaria italica
Seita.2G336000 5.0kb upstream 5.0kb upstream 11284 true scaffold_2: 42021702-42032985 Setaria italica
Seita.2G336000 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 42021702-42026701 Setaria italica
Seita.2G336000 5.0kb downstream 5.0kb downstream 11284 true scaffold_2: 42026702-42037985 Setaria italica
Seita.2G336000 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 42032986-42037985 Setaria italica
Seita.2G336000 10.0kb upstream 10.0kb upstream 16284 true scaffold_2: 42016702-42032985 Setaria italica
Seita.2G336000 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 42016702-42026701 Setaria italica
Seita.2G336000 10.0kb downstream 10.0kb downstream 16284 true scaffold_2: 42026702-42042985 Setaria italica
Seita.2G336000 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 42032986-42042985 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177702 5267 Panicoideae View MSA
124578793 5269 Grass View MSA
122046735 5273 Angiosperm View MSA
121350874 5274 Embryophyte View MSA
123426017 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.094        
cufflinks 8.216       High
cufflinks 3.334        
cufflinks 2.689       Low
cufflinks 2.56       Low
cufflinks 7.254       High
cufflinks 3.525        
cufflinks 5.383        
cufflinks 3.683        
cufflinks 4.661        
cufflinks 5.429        
cufflinks 4.474        
cufflinks 4.534        
cufflinks 3.815        
cufflinks 5.728        
cufflinks 2.567       Low
cufflinks 5.637        
cufflinks 1.758       Low
cufflinks 2.785       Low
cufflinks 5.821        

0 Strain