Gene : Seita.J028900 S. italica v2.2
Defline:  (1 of 3) PTHR11206//PTHR11206:SF176 - MULTIDRUG RESISTANCE PROTEIN Genomic Order:  1
Name:  ? Seita.J028900 Secondary Identifier:  ? PAC:32714804
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.J028900 0.5kb upstream 0.5kb upstream 1515 true scaffold_247: 3983-5497 Setaria italica
Seita.J028900 0.5kb upstream 0.5kb upstream 88 false scaffold_247: 5410-5497 Setaria italica
Seita.J028900 0.5kb downstream 0.5kb downstream 1927 true scaffold_247: 3483-5409 Setaria italica
Seita.J028900 0.5kb downstream 0.5kb downstream 500 false scaffold_247: 3483-3982 Setaria italica
Seita.J028900 1.0kb upstream 1.0kb upstream 1515 true scaffold_247: 3983-5497 Setaria italica
Seita.J028900 1.0kb upstream 1.0kb upstream 88 false scaffold_247: 5410-5497 Setaria italica
Seita.J028900 1.0kb downstream 1.0kb downstream 2427 true scaffold_247: 2983-5409 Setaria italica
Seita.J028900 1.0kb downstream 1.0kb downstream 1000 false scaffold_247: 2983-3982 Setaria italica
Seita.J028900 2.0kb upstream 2.0kb upstream 1515 true scaffold_247: 3983-5497 Setaria italica
Seita.J028900 2.0kb upstream 2.0kb upstream 88 false scaffold_247: 5410-5497 Setaria italica
Seita.J028900 2.0kb downstream 2.0kb downstream 3427 true scaffold_247: 1983-5409 Setaria italica
Seita.J028900 2.0kb downstream 2.0kb downstream 2000 false scaffold_247: 1983-3982 Setaria italica
Seita.J028900 5.0kb upstream 5.0kb upstream 1515 true scaffold_247: 3983-5497 Setaria italica
Seita.J028900 5.0kb upstream 5.0kb upstream 88 false scaffold_247: 5410-5497 Setaria italica
Seita.J028900 5.0kb downstream 5.0kb downstream 5409 true scaffold_247: 1-5409 Setaria italica
Seita.J028900 5.0kb downstream 5.0kb downstream 3982 false scaffold_247: 1-3982 Setaria italica
Seita.J028900 10.0kb upstream 10.0kb upstream 1515 true scaffold_247: 3983-5497 Setaria italica
Seita.J028900 10.0kb upstream 10.0kb upstream 88 false scaffold_247: 5410-5497 Setaria italica
Seita.J028900 10.0kb downstream 10.0kb downstream 5409 true scaffold_247: 1-5409 Setaria italica
Seita.J028900 10.0kb downstream 10.0kb downstream 3982 false scaffold_247: 1-3982 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199003 5267 Panicoideae View MSA
124583769 5269 Grass View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.047     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low Low
cufflinks 0.048     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low  
cufflinks 0.058     Low  
cufflinks 0.023     Low  
cufflinks 0.017     Low  
cufflinks 0.067     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.085     Low High

0 Strain