Gene : Seita.3G002000 S. italica v2.2
Defline:  (1 of 1) PTHR18916 - DYNACTIN 1-RELATED MICROTUBULE-BINDING Genomic Order:  20
Name:  ? Seita.3G002000 Secondary Identifier:  ? PAC:32712080
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G002000 0.5kb upstream 0.5kb upstream 2886 true scaffold_3: 72960-75845 Setaria italica
Seita.3G002000 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 72960-73459 Setaria italica
Seita.3G002000 0.5kb downstream 0.5kb downstream 2886 true scaffold_3: 73460-76345 Setaria italica
Seita.3G002000 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 75846-76345 Setaria italica
Seita.3G002000 1.0kb upstream 1.0kb upstream 3386 true scaffold_3: 72460-75845 Setaria italica
Seita.3G002000 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 72460-73459 Setaria italica
Seita.3G002000 1.0kb downstream 1.0kb downstream 3386 true scaffold_3: 73460-76845 Setaria italica
Seita.3G002000 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 75846-76845 Setaria italica
Seita.3G002000 2.0kb upstream 2.0kb upstream 4386 true scaffold_3: 71460-75845 Setaria italica
Seita.3G002000 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 71460-73459 Setaria italica
Seita.3G002000 2.0kb downstream 2.0kb downstream 4386 true scaffold_3: 73460-77845 Setaria italica
Seita.3G002000 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 75846-77845 Setaria italica
Seita.3G002000 5.0kb upstream 5.0kb upstream 7386 true scaffold_3: 68460-75845 Setaria italica
Seita.3G002000 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 68460-73459 Setaria italica
Seita.3G002000 5.0kb downstream 5.0kb downstream 7386 true scaffold_3: 73460-80845 Setaria italica
Seita.3G002000 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 75846-80845 Setaria italica
Seita.3G002000 10.0kb upstream 10.0kb upstream 12386 true scaffold_3: 63460-75845 Setaria italica
Seita.3G002000 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 63460-73459 Setaria italica
Seita.3G002000 10.0kb downstream 10.0kb downstream 12386 true scaffold_3: 73460-85845 Setaria italica
Seita.3G002000 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 75846-85845 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178759 5267 Panicoideae View MSA
124575162 5269 Grass View MSA
122045722 5273 Angiosperm View MSA
121345954 5274 Embryophyte View MSA
123423760 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.491        
cufflinks 6.742        
cufflinks 3.323       Low
cufflinks 3.695        
cufflinks 3.675        
cufflinks 6.125        
cufflinks 3.928        
cufflinks 5.691        
cufflinks 2.961       Low
cufflinks 12.432       High
cufflinks 4.41        
cufflinks 4.855        
cufflinks 4.816        
cufflinks 5.998        
cufflinks 6.107        
cufflinks 3.2       Low
cufflinks 7.013       High
cufflinks 3.561        
cufflinks 3.636        
cufflinks 5.709        

0 Strain