Gene : Seita.3G012700 S. italica v2.2
Defline:  (1 of 1) PTHR10827:SF54 - CALCIUM-BINDING EF HAND FAMILY PROTEIN Genomic Order:  127
Name:  ? Seita.3G012700 Secondary Identifier:  ? PAC:32711127
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G012700 0.5kb upstream 0.5kb upstream 2071 true scaffold_3: 670427-672497 Setaria italica
Seita.3G012700 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 671998-672497 Setaria italica
Seita.3G012700 0.5kb downstream 0.5kb downstream 2071 true scaffold_3: 669927-671997 Setaria italica
Seita.3G012700 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 669927-670426 Setaria italica
Seita.3G012700 1.0kb upstream 1.0kb upstream 2571 true scaffold_3: 670427-672997 Setaria italica
Seita.3G012700 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 671998-672997 Setaria italica
Seita.3G012700 1.0kb downstream 1.0kb downstream 2571 true scaffold_3: 669427-671997 Setaria italica
Seita.3G012700 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 669427-670426 Setaria italica
Seita.3G012700 2.0kb upstream 2.0kb upstream 3571 true scaffold_3: 670427-673997 Setaria italica
Seita.3G012700 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 671998-673997 Setaria italica
Seita.3G012700 2.0kb downstream 2.0kb downstream 3571 true scaffold_3: 668427-671997 Setaria italica
Seita.3G012700 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 668427-670426 Setaria italica
Seita.3G012700 5.0kb upstream 5.0kb upstream 6571 true scaffold_3: 670427-676997 Setaria italica
Seita.3G012700 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 671998-676997 Setaria italica
Seita.3G012700 5.0kb downstream 5.0kb downstream 6571 true scaffold_3: 665427-671997 Setaria italica
Seita.3G012700 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 665427-670426 Setaria italica
Seita.3G012700 10.0kb upstream 10.0kb upstream 11571 true scaffold_3: 670427-681997 Setaria italica
Seita.3G012700 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 671998-681997 Setaria italica
Seita.3G012700 10.0kb downstream 10.0kb downstream 11571 true scaffold_3: 660427-671997 Setaria italica
Seita.3G012700 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 660427-670426 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185723 5267 Panicoideae View MSA
124584658 5269 Grass View MSA
122049125 5273 Angiosperm View MSA
121311258 5274 Embryophyte View MSA
123348573 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.081     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain