Gene : Seita.2G420300 S. italica v2.2
Defline:  (1 of 2) PTHR12136//PTHR12136:SF64 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR Genomic Order:  4203
Name:  ? Seita.2G420300 Secondary Identifier:  ? PAC:32721939
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G420300 0.5kb upstream 0.5kb upstream 6558 true scaffold_2: 47505888-47512445 Setaria italica
Seita.2G420300 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 47511946-47512445 Setaria italica
Seita.2G420300 0.5kb downstream 0.5kb downstream 6558 true scaffold_2: 47505388-47511945 Setaria italica
Seita.2G420300 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 47505388-47505887 Setaria italica
Seita.2G420300 1.0kb upstream 1.0kb upstream 7058 true scaffold_2: 47505888-47512945 Setaria italica
Seita.2G420300 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 47511946-47512945 Setaria italica
Seita.2G420300 1.0kb downstream 1.0kb downstream 7058 true scaffold_2: 47504888-47511945 Setaria italica
Seita.2G420300 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 47504888-47505887 Setaria italica
Seita.2G420300 2.0kb upstream 2.0kb upstream 8058 true scaffold_2: 47505888-47513945 Setaria italica
Seita.2G420300 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 47511946-47513945 Setaria italica
Seita.2G420300 2.0kb downstream 2.0kb downstream 8058 true scaffold_2: 47503888-47511945 Setaria italica
Seita.2G420300 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 47503888-47505887 Setaria italica
Seita.2G420300 5.0kb upstream 5.0kb upstream 11058 true scaffold_2: 47505888-47516945 Setaria italica
Seita.2G420300 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 47511946-47516945 Setaria italica
Seita.2G420300 5.0kb downstream 5.0kb downstream 11058 true scaffold_2: 47500888-47511945 Setaria italica
Seita.2G420300 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 47500888-47505887 Setaria italica
Seita.2G420300 10.0kb upstream 10.0kb upstream 16058 true scaffold_2: 47505888-47521945 Setaria italica
Seita.2G420300 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 47511946-47521945 Setaria italica
Seita.2G420300 10.0kb downstream 10.0kb downstream 16058 true scaffold_2: 47495888-47511945 Setaria italica
Seita.2G420300 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 47495888-47505887 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187189 5267 Panicoideae View MSA
124586015 5269 Grass View MSA
122042649 5273 Angiosperm View MSA
121346561 5274 Embryophyte View MSA
123428121 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.028     Low  
cufflinks 0.184       High
cufflinks 0.041     Low  
cufflinks 0.042     Low  
cufflinks 0.03     Low  
cufflinks 0.178       High
cufflinks 0.068     Low  
cufflinks 0.118     Low High
cufflinks 0.031     Low  
cufflinks 0.018     Low Low
cufflinks 0.025     Low Low
cufflinks 0.087     Low  
cufflinks 0.083     Low  
cufflinks 0.019     Low Low
cufflinks 0.074     Low  
cufflinks 0.075     Low  
cufflinks 0.072     Low  
cufflinks 0.043     Low  
cufflinks 0.032     Low  
cufflinks 0.087     Low  

0 Strain