Gene : Seita.2G427100 S. italica v2.2
Defline:  (1 of 1) PTHR30540//PTHR30540:SF32 - OSMOTIC STRESS POTASSIUM TRANSPORTER Genomic Order:  4271
Name:  ? Seita.2G427100 Secondary Identifier:  ? PAC:32720565
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.2G427100 0.5kb upstream 0.5kb upstream 6209 true scaffold_2: 47922610-47928818 Setaria italica
Seita.2G427100 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 47922610-47923109 Setaria italica
Seita.2G427100 0.5kb downstream 0.5kb downstream 6209 true scaffold_2: 47923110-47929318 Setaria italica
Seita.2G427100 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 47928819-47929318 Setaria italica
Seita.2G427100 1.0kb upstream 1.0kb upstream 6709 true scaffold_2: 47922110-47928818 Setaria italica
Seita.2G427100 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 47922110-47923109 Setaria italica
Seita.2G427100 1.0kb downstream 1.0kb downstream 6709 true scaffold_2: 47923110-47929818 Setaria italica
Seita.2G427100 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 47928819-47929818 Setaria italica
Seita.2G427100 2.0kb upstream 2.0kb upstream 7709 true scaffold_2: 47921110-47928818 Setaria italica
Seita.2G427100 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 47921110-47923109 Setaria italica
Seita.2G427100 2.0kb downstream 2.0kb downstream 7709 true scaffold_2: 47923110-47930818 Setaria italica
Seita.2G427100 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 47928819-47930818 Setaria italica
Seita.2G427100 5.0kb upstream 5.0kb upstream 10709 true scaffold_2: 47918110-47928818 Setaria italica
Seita.2G427100 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 47918110-47923109 Setaria italica
Seita.2G427100 5.0kb downstream 5.0kb downstream 10709 true scaffold_2: 47923110-47933818 Setaria italica
Seita.2G427100 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 47928819-47933818 Setaria italica
Seita.2G427100 10.0kb upstream 10.0kb upstream 15709 true scaffold_2: 47913110-47928818 Setaria italica
Seita.2G427100 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 47913110-47923109 Setaria italica
Seita.2G427100 10.0kb downstream 10.0kb downstream 15709 true scaffold_2: 47923110-47938818 Setaria italica
Seita.2G427100 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 47928819-47938818 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182354 5267 Panicoideae View MSA
124575151 5269 Grass View MSA
122050698 5273 Angiosperm View MSA
123429147 5275 Viridiplantae View MSA
121349453 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.635     High  
cufflinks 11.224       Low
cufflinks 23.552     High  
cufflinks 42.396     High  
cufflinks 91.321     High High
cufflinks 10.955       Low
cufflinks 63.629     High High
cufflinks 9.821       Low
cufflinks 146.772     High High
cufflinks 23.696     High  
cufflinks 36.169     High  
cufflinks 20.404     High  
cufflinks 32.372     High  
cufflinks 42.292     High  
cufflinks 41.645     High  
cufflinks 25.201     High  
cufflinks 21.11     High  
cufflinks 49.636     High  
cufflinks 28.64     High  
cufflinks 26.76     High  

0 Strain