Gene : Seita.3G044800 S. italica v2.2
Defline:  (1 of 1) PTHR22942:SF15 - DNA REPAIR PROTEIN RAD51 HOMOLOG 2 Genomic Order:  448
Name:  ? Seita.3G044800 Secondary Identifier:  ? PAC:32710605
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G044800 0.5kb upstream 0.5kb upstream 12647 true scaffold_3: 2739119-2751765 Setaria italica
Seita.3G044800 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2751266-2751765 Setaria italica
Seita.3G044800 0.5kb downstream 0.5kb downstream 12647 true scaffold_3: 2738619-2751265 Setaria italica
Seita.3G044800 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2738619-2739118 Setaria italica
Seita.3G044800 1.0kb upstream 1.0kb upstream 13147 true scaffold_3: 2739119-2752265 Setaria italica
Seita.3G044800 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2751266-2752265 Setaria italica
Seita.3G044800 1.0kb downstream 1.0kb downstream 13147 true scaffold_3: 2738119-2751265 Setaria italica
Seita.3G044800 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2738119-2739118 Setaria italica
Seita.3G044800 2.0kb upstream 2.0kb upstream 14147 true scaffold_3: 2739119-2753265 Setaria italica
Seita.3G044800 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2751266-2753265 Setaria italica
Seita.3G044800 2.0kb downstream 2.0kb downstream 14147 true scaffold_3: 2737119-2751265 Setaria italica
Seita.3G044800 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2737119-2739118 Setaria italica
Seita.3G044800 5.0kb upstream 5.0kb upstream 17147 true scaffold_3: 2739119-2756265 Setaria italica
Seita.3G044800 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2751266-2756265 Setaria italica
Seita.3G044800 5.0kb downstream 5.0kb downstream 17147 true scaffold_3: 2734119-2751265 Setaria italica
Seita.3G044800 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2734119-2739118 Setaria italica
Seita.3G044800 10.0kb upstream 10.0kb upstream 22147 true scaffold_3: 2739119-2761265 Setaria italica
Seita.3G044800 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2751266-2761265 Setaria italica
Seita.3G044800 10.0kb downstream 10.0kb downstream 22147 true scaffold_3: 2729119-2751265 Setaria italica
Seita.3G044800 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2729119-2739118 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179621 5267 Panicoideae View MSA
124569845 5269 Grass View MSA
122048884 5273 Angiosperm View MSA
121349692 5274 Embryophyte View MSA
123425830 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.014     Low  
cufflinks 0.029     Low  
cufflinks 0.003     Low Low
cufflinks 0.002     Low Low
cufflinks 0.003     Low Low
cufflinks 0.027     Low  
cufflinks 0.019     Low  
cufflinks 0.04     Low High
cufflinks 0.02     Low  
cufflinks 0.048     Low High
cufflinks 0.03     Low  
cufflinks 0.022     Low  
cufflinks 0.021     Low  
cufflinks 0.003     Low Low
cufflinks 0.029     Low  
cufflinks 0.011     Low  
cufflinks 0.032     Low  
cufflinks 0.007     Low  
cufflinks 0.003     Low Low
cufflinks 0.035     Low  

0 Strain