Gene : Seita.3G142400 S. italica v2.2
Defline:  (1 of 2) PTHR10093 - IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG Genomic Order:  1424
Name:  ? Seita.3G142400 Secondary Identifier:  ? PAC:32710329
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G142400 0.5kb upstream 0.5kb upstream 3761 true scaffold_3: 10009706-10013466 Setaria italica
Seita.3G142400 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 10012967-10013466 Setaria italica
Seita.3G142400 0.5kb downstream 0.5kb downstream 3761 true scaffold_3: 10009206-10012966 Setaria italica
Seita.3G142400 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 10009206-10009705 Setaria italica
Seita.3G142400 1.0kb upstream 1.0kb upstream 4261 true scaffold_3: 10009706-10013966 Setaria italica
Seita.3G142400 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 10012967-10013966 Setaria italica
Seita.3G142400 1.0kb downstream 1.0kb downstream 4261 true scaffold_3: 10008706-10012966 Setaria italica
Seita.3G142400 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 10008706-10009705 Setaria italica
Seita.3G142400 2.0kb upstream 2.0kb upstream 5261 true scaffold_3: 10009706-10014966 Setaria italica
Seita.3G142400 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 10012967-10014966 Setaria italica
Seita.3G142400 2.0kb downstream 2.0kb downstream 5261 true scaffold_3: 10007706-10012966 Setaria italica
Seita.3G142400 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 10007706-10009705 Setaria italica
Seita.3G142400 5.0kb upstream 5.0kb upstream 8261 true scaffold_3: 10009706-10017966 Setaria italica
Seita.3G142400 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 10012967-10017966 Setaria italica
Seita.3G142400 5.0kb downstream 5.0kb downstream 8261 true scaffold_3: 10004706-10012966 Setaria italica
Seita.3G142400 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 10004706-10009705 Setaria italica
Seita.3G142400 10.0kb upstream 10.0kb upstream 13261 true scaffold_3: 10009706-10022966 Setaria italica
Seita.3G142400 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 10012967-10022966 Setaria italica
Seita.3G142400 10.0kb downstream 10.0kb downstream 13261 true scaffold_3: 9999706-10012966 Setaria italica
Seita.3G142400 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 9999706-10009705 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026522 5273 Angiosperm View MSA
122187714 5267 Panicoideae View MSA
124583516 5269 Grass View MSA
121348454 5274 Embryophyte View MSA
123428131 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.049     Low Low
cufflinks 0.317        
cufflinks 0.365        
cufflinks 0.479        
cufflinks 0.304        
cufflinks 0.341        
cufflinks 0.126        
cufflinks 0.545        
cufflinks 0.152        
cufflinks 0.162     Low  
cufflinks 0.055     Low Low
cufflinks 0.122     Low  
cufflinks 1.17       High
cufflinks 1.589       High
cufflinks 0.193        
cufflinks 0.464        
cufflinks 0.142        
cufflinks 2.506       High
cufflinks 2.788       High
cufflinks 0.079     Low Low

0 Strain