Gene : Seita.3G152400 S. italica v2.2
Defline:  (1 of 2) PTHR11566:SF58 - DYNAMIN-RELATED PROTEIN 1A Genomic Order:  1524
Name:  ? Seita.3G152400 Secondary Identifier:  ? PAC:32713561
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G152400 0.5kb upstream 0.5kb upstream 7614 true scaffold_3: 11024815-11032428 Setaria italica
Seita.3G152400 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 11024815-11025314 Setaria italica
Seita.3G152400 0.5kb downstream 0.5kb downstream 7614 true scaffold_3: 11025315-11032928 Setaria italica
Seita.3G152400 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 11032429-11032928 Setaria italica
Seita.3G152400 1.0kb upstream 1.0kb upstream 8114 true scaffold_3: 11024315-11032428 Setaria italica
Seita.3G152400 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 11024315-11025314 Setaria italica
Seita.3G152400 1.0kb downstream 1.0kb downstream 8114 true scaffold_3: 11025315-11033428 Setaria italica
Seita.3G152400 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 11032429-11033428 Setaria italica
Seita.3G152400 2.0kb upstream 2.0kb upstream 9114 true scaffold_3: 11023315-11032428 Setaria italica
Seita.3G152400 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 11023315-11025314 Setaria italica
Seita.3G152400 2.0kb downstream 2.0kb downstream 9114 true scaffold_3: 11025315-11034428 Setaria italica
Seita.3G152400 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 11032429-11034428 Setaria italica
Seita.3G152400 5.0kb upstream 5.0kb upstream 12114 true scaffold_3: 11020315-11032428 Setaria italica
Seita.3G152400 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 11020315-11025314 Setaria italica
Seita.3G152400 5.0kb downstream 5.0kb downstream 12114 true scaffold_3: 11025315-11037428 Setaria italica
Seita.3G152400 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 11032429-11037428 Setaria italica
Seita.3G152400 10.0kb upstream 10.0kb upstream 17114 true scaffold_3: 11015315-11032428 Setaria italica
Seita.3G152400 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 11015315-11025314 Setaria italica
Seita.3G152400 10.0kb downstream 10.0kb downstream 17114 true scaffold_3: 11025315-11042428 Setaria italica
Seita.3G152400 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 11032429-11042428 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183502 5267 Panicoideae View MSA
124588433 5269 Grass View MSA
122041649 5273 Angiosperm View MSA
121348434 5274 Embryophyte View MSA
123428236 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.465     High  
cufflinks 23.26     High  
cufflinks 10.045       Low
cufflinks 8.109       Low
cufflinks 8.307       Low
cufflinks 23.321     High  
cufflinks 17.244     High  
cufflinks 16.297     High  
cufflinks 13.132     High  
cufflinks 23.627     High  
cufflinks 22.683     High  
cufflinks 27.363     High High
cufflinks 17.375     High  
cufflinks 16.617     High  
cufflinks 28.328     High High
cufflinks 11.082       Low
cufflinks 22.975     High  
cufflinks 22.179     High  
cufflinks 13.989     High  
cufflinks 26.05     High High

0 Strain