Gene : Seita.3G256900 S. italica v2.2
Defline:  (1 of 1) PTHR31585:SF2 - FOLATE-BIOPTERIN TRANSPORTER 7-RELATED Genomic Order:  2569
Name:  ? Seita.3G256900 Secondary Identifier:  ? PAC:32712339
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G256900 0.5kb upstream 0.5kb upstream 3928 true scaffold_3: 22317815-22321742 Setaria italica
Seita.3G256900 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 22321243-22321742 Setaria italica
Seita.3G256900 0.5kb downstream 0.5kb downstream 3928 true scaffold_3: 22317315-22321242 Setaria italica
Seita.3G256900 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 22317315-22317814 Setaria italica
Seita.3G256900 1.0kb upstream 1.0kb upstream 4428 true scaffold_3: 22317815-22322242 Setaria italica
Seita.3G256900 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 22321243-22322242 Setaria italica
Seita.3G256900 1.0kb downstream 1.0kb downstream 4428 true scaffold_3: 22316815-22321242 Setaria italica
Seita.3G256900 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 22316815-22317814 Setaria italica
Seita.3G256900 2.0kb upstream 2.0kb upstream 5428 true scaffold_3: 22317815-22323242 Setaria italica
Seita.3G256900 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 22321243-22323242 Setaria italica
Seita.3G256900 2.0kb downstream 2.0kb downstream 5428 true scaffold_3: 22315815-22321242 Setaria italica
Seita.3G256900 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 22315815-22317814 Setaria italica
Seita.3G256900 5.0kb upstream 5.0kb upstream 8428 true scaffold_3: 22317815-22326242 Setaria italica
Seita.3G256900 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 22321243-22326242 Setaria italica
Seita.3G256900 5.0kb downstream 5.0kb downstream 8428 true scaffold_3: 22312815-22321242 Setaria italica
Seita.3G256900 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 22312815-22317814 Setaria italica
Seita.3G256900 10.0kb upstream 10.0kb upstream 13428 true scaffold_3: 22317815-22331242 Setaria italica
Seita.3G256900 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 22321243-22331242 Setaria italica
Seita.3G256900 10.0kb downstream 10.0kb downstream 13428 true scaffold_3: 22307815-22321242 Setaria italica
Seita.3G256900 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 22307815-22317814 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188405 5267 Panicoideae View MSA
124576274 5269 Grass View MSA
122049855 5273 Angiosperm View MSA
121350266 5274 Embryophyte View MSA
123425895 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.052        
cufflinks 3.735        
cufflinks 8.326       High
cufflinks 9.47       High
cufflinks 6.877        
cufflinks 3.688        
cufflinks 6.047        
cufflinks 4.761        
cufflinks 5.163        
cufflinks 1.97       Low
cufflinks 3.206        
cufflinks 3.367        
cufflinks 2.353       Low
cufflinks 5.207        
cufflinks 2.404       Low
cufflinks 6.396        
cufflinks 2.26       Low
cufflinks 9.187       High
cufflinks 7.765       High
cufflinks 3.293        

0 Strain