Gene : Seita.3G182200 S. italica v2.2
Defline:  (1 of 1) PTHR33322:SF7 - BAG FAMILY MOLECULAR CHAPERONE REGULATOR 8, CHLOROPLASTIC Genomic Order:  1822
Name:  ? Seita.3G182200 Secondary Identifier:  ? PAC:32713300
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G182200 0.5kb upstream 0.5kb upstream 2423 true scaffold_3: 13747395-13749817 Setaria italica
Seita.3G182200 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13747395-13747894 Setaria italica
Seita.3G182200 0.5kb downstream 0.5kb downstream 2423 true scaffold_3: 13747895-13750317 Setaria italica
Seita.3G182200 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13749818-13750317 Setaria italica
Seita.3G182200 1.0kb upstream 1.0kb upstream 2923 true scaffold_3: 13746895-13749817 Setaria italica
Seita.3G182200 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13746895-13747894 Setaria italica
Seita.3G182200 1.0kb downstream 1.0kb downstream 2923 true scaffold_3: 13747895-13750817 Setaria italica
Seita.3G182200 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13749818-13750817 Setaria italica
Seita.3G182200 2.0kb upstream 2.0kb upstream 3923 true scaffold_3: 13745895-13749817 Setaria italica
Seita.3G182200 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13745895-13747894 Setaria italica
Seita.3G182200 2.0kb downstream 2.0kb downstream 3923 true scaffold_3: 13747895-13751817 Setaria italica
Seita.3G182200 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13749818-13751817 Setaria italica
Seita.3G182200 5.0kb upstream 5.0kb upstream 6923 true scaffold_3: 13742895-13749817 Setaria italica
Seita.3G182200 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13742895-13747894 Setaria italica
Seita.3G182200 5.0kb downstream 5.0kb downstream 6923 true scaffold_3: 13747895-13754817 Setaria italica
Seita.3G182200 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13749818-13754817 Setaria italica
Seita.3G182200 10.0kb upstream 10.0kb upstream 11923 true scaffold_3: 13737895-13749817 Setaria italica
Seita.3G182200 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13737895-13747894 Setaria italica
Seita.3G182200 10.0kb downstream 10.0kb downstream 11923 true scaffold_3: 13747895-13759817 Setaria italica
Seita.3G182200 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13749818-13759817 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029255 5273 Angiosperm View MSA
122181096 5267 Panicoideae View MSA
124589538 5269 Grass View MSA
121298610 5274 Embryophyte View MSA
123336572 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.949        
cufflinks 9.215        
cufflinks 2.799       Low
cufflinks 3.126        
cufflinks 2.884       Low
cufflinks 9.833       High
cufflinks 5.998        
cufflinks 8.313        
cufflinks 4.091        
cufflinks 13.006       High
cufflinks 8.817        
cufflinks 7.701        
cufflinks 2.86       Low
cufflinks 2.662       Low
cufflinks 6.357        
cufflinks 4.525        
cufflinks 9.034        
cufflinks 3.646        
cufflinks 2.105       Low
cufflinks 7.314        

0 Strain