Gene : Seita.3G216200 S. italica v2.2
Genomic Order:  2162 Name:  ? Seita.3G216200
Secondary Identifier:  ? PAC:32710480
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G216200 0.5kb upstream 0.5kb upstream 1763 true scaffold_3: 17529258-17531020 Setaria italica
Seita.3G216200 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 17530521-17531020 Setaria italica
Seita.3G216200 0.5kb downstream 0.5kb downstream 1763 true scaffold_3: 17528758-17530520 Setaria italica
Seita.3G216200 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 17528758-17529257 Setaria italica
Seita.3G216200 1.0kb upstream 1.0kb upstream 2263 true scaffold_3: 17529258-17531520 Setaria italica
Seita.3G216200 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 17530521-17531520 Setaria italica
Seita.3G216200 1.0kb downstream 1.0kb downstream 2263 true scaffold_3: 17528258-17530520 Setaria italica
Seita.3G216200 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 17528258-17529257 Setaria italica
Seita.3G216200 2.0kb upstream 2.0kb upstream 3263 true scaffold_3: 17529258-17532520 Setaria italica
Seita.3G216200 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 17530521-17532520 Setaria italica
Seita.3G216200 2.0kb downstream 2.0kb downstream 3263 true scaffold_3: 17527258-17530520 Setaria italica
Seita.3G216200 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 17527258-17529257 Setaria italica
Seita.3G216200 5.0kb upstream 5.0kb upstream 6263 true scaffold_3: 17529258-17535520 Setaria italica
Seita.3G216200 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 17530521-17535520 Setaria italica
Seita.3G216200 5.0kb downstream 5.0kb downstream 6263 true scaffold_3: 17524258-17530520 Setaria italica
Seita.3G216200 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 17524258-17529257 Setaria italica
Seita.3G216200 10.0kb upstream 10.0kb upstream 11263 true scaffold_3: 17529258-17540520 Setaria italica
Seita.3G216200 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 17530521-17540520 Setaria italica
Seita.3G216200 10.0kb downstream 10.0kb downstream 11263 true scaffold_3: 17519258-17530520 Setaria italica
Seita.3G216200 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 17519258-17529257 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199298 5267 Panicoideae View MSA
124590402 5269 Grass View MSA
122048825 5273 Angiosperm View MSA
121351710 5274 Embryophyte View MSA
123427809 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain