Gene : Seita.3G312300 S. italica v2.2
Defline:  (1 of 14) 2.7.13.3 - Histidine kinase / Protein kinase (histidine) Genomic Order:  3123
Name:  ? Seita.3G312300 Secondary Identifier:  ? PAC:32714618
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G312300 0.5kb upstream 0.5kb upstream 11294 true scaffold_3: 38000024-38011317 Setaria italica
Seita.3G312300 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 38000024-38000523 Setaria italica
Seita.3G312300 0.5kb downstream 0.5kb downstream 11294 true scaffold_3: 38000524-38011817 Setaria italica
Seita.3G312300 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 38011318-38011817 Setaria italica
Seita.3G312300 1.0kb upstream 1.0kb upstream 11794 true scaffold_3: 37999524-38011317 Setaria italica
Seita.3G312300 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 37999524-38000523 Setaria italica
Seita.3G312300 1.0kb downstream 1.0kb downstream 11794 true scaffold_3: 38000524-38012317 Setaria italica
Seita.3G312300 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 38011318-38012317 Setaria italica
Seita.3G312300 2.0kb upstream 2.0kb upstream 12794 true scaffold_3: 37998524-38011317 Setaria italica
Seita.3G312300 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 37998524-38000523 Setaria italica
Seita.3G312300 2.0kb downstream 2.0kb downstream 12794 true scaffold_3: 38000524-38013317 Setaria italica
Seita.3G312300 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 38011318-38013317 Setaria italica
Seita.3G312300 5.0kb upstream 5.0kb upstream 15794 true scaffold_3: 37995524-38011317 Setaria italica
Seita.3G312300 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 37995524-38000523 Setaria italica
Seita.3G312300 5.0kb downstream 5.0kb downstream 15794 true scaffold_3: 38000524-38016317 Setaria italica
Seita.3G312300 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 38011318-38016317 Setaria italica
Seita.3G312300 10.0kb upstream 10.0kb upstream 20794 true scaffold_3: 37990524-38011317 Setaria italica
Seita.3G312300 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 37990524-38000523 Setaria italica
Seita.3G312300 10.0kb downstream 10.0kb downstream 20794 true scaffold_3: 38000524-38021317 Setaria italica
Seita.3G312300 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 38011318-38021317 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190555 5267 Panicoideae View MSA
124581427 5269 Grass View MSA
122045581 5273 Angiosperm View MSA
121347593 5274 Embryophyte View MSA
123426016 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.652        
cufflinks 4.014        
cufflinks 4.298        
cufflinks 3.92        
cufflinks 4.348        
cufflinks 3.799        
cufflinks 5.253        
cufflinks 5.234        
cufflinks 6.669       High
cufflinks 2.53       Low
cufflinks 3.298        
cufflinks 2.551       Low
cufflinks 2.895        
cufflinks 4.082        
cufflinks 3.382        
cufflinks 7.961       High
cufflinks 2.613       Low
cufflinks 4.564        
cufflinks 3.771        
cufflinks 2.612       Low

0 Strain