Gene : Seita.3G266700 S. italica v2.2
Defline:  (1 of 3) PTHR31636:SF13 - SCARECROW-LIKE PROTEIN 3 Genomic Order:  2667
Name:  ? Seita.3G266700 Secondary Identifier:  ? PAC:32713844
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G266700 0.5kb upstream 0.5kb upstream 3216 true scaffold_3: 23617707-23620922 Setaria italica
Seita.3G266700 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 23620423-23620922 Setaria italica
Seita.3G266700 0.5kb downstream 0.5kb downstream 3216 true scaffold_3: 23617207-23620422 Setaria italica
Seita.3G266700 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 23617207-23617706 Setaria italica
Seita.3G266700 1.0kb upstream 1.0kb upstream 3716 true scaffold_3: 23617707-23621422 Setaria italica
Seita.3G266700 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 23620423-23621422 Setaria italica
Seita.3G266700 1.0kb downstream 1.0kb downstream 3716 true scaffold_3: 23616707-23620422 Setaria italica
Seita.3G266700 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 23616707-23617706 Setaria italica
Seita.3G266700 2.0kb upstream 2.0kb upstream 4716 true scaffold_3: 23617707-23622422 Setaria italica
Seita.3G266700 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 23620423-23622422 Setaria italica
Seita.3G266700 2.0kb downstream 2.0kb downstream 4716 true scaffold_3: 23615707-23620422 Setaria italica
Seita.3G266700 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 23615707-23617706 Setaria italica
Seita.3G266700 5.0kb upstream 5.0kb upstream 7716 true scaffold_3: 23617707-23625422 Setaria italica
Seita.3G266700 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 23620423-23625422 Setaria italica
Seita.3G266700 5.0kb downstream 5.0kb downstream 7716 true scaffold_3: 23612707-23620422 Setaria italica
Seita.3G266700 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 23612707-23617706 Setaria italica
Seita.3G266700 10.0kb upstream 10.0kb upstream 12716 true scaffold_3: 23617707-23630422 Setaria italica
Seita.3G266700 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 23620423-23630422 Setaria italica
Seita.3G266700 10.0kb downstream 10.0kb downstream 12716 true scaffold_3: 23607707-23620422 Setaria italica
Seita.3G266700 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 23607707-23617706 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122200262 5267 Panicoideae View MSA
124468237 5269 Grass View MSA
122043320 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain