Gene : Seita.3G271200 S. italica v2.2
Defline:  (1 of 1) PTHR13166:SF2 - COMPLEX III ASSEMBLY FACTOR LYRM7 Genomic Order:  2712
Name:  ? Seita.3G271200 Secondary Identifier:  ? PAC:32712009
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G271200 0.5kb upstream 0.5kb upstream 5399 true scaffold_3: 24313446-24318844 Setaria italica
Seita.3G271200 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 24313446-24313945 Setaria italica
Seita.3G271200 0.5kb downstream 0.5kb downstream 5399 true scaffold_3: 24313946-24319344 Setaria italica
Seita.3G271200 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 24318845-24319344 Setaria italica
Seita.3G271200 1.0kb upstream 1.0kb upstream 5899 true scaffold_3: 24312946-24318844 Setaria italica
Seita.3G271200 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 24312946-24313945 Setaria italica
Seita.3G271200 1.0kb downstream 1.0kb downstream 5899 true scaffold_3: 24313946-24319844 Setaria italica
Seita.3G271200 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 24318845-24319844 Setaria italica
Seita.3G271200 2.0kb upstream 2.0kb upstream 6899 true scaffold_3: 24311946-24318844 Setaria italica
Seita.3G271200 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 24311946-24313945 Setaria italica
Seita.3G271200 2.0kb downstream 2.0kb downstream 6899 true scaffold_3: 24313946-24320844 Setaria italica
Seita.3G271200 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 24318845-24320844 Setaria italica
Seita.3G271200 5.0kb upstream 5.0kb upstream 9899 true scaffold_3: 24308946-24318844 Setaria italica
Seita.3G271200 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 24308946-24313945 Setaria italica
Seita.3G271200 5.0kb downstream 5.0kb downstream 9899 true scaffold_3: 24313946-24323844 Setaria italica
Seita.3G271200 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 24318845-24323844 Setaria italica
Seita.3G271200 10.0kb upstream 10.0kb upstream 14899 true scaffold_3: 24303946-24318844 Setaria italica
Seita.3G271200 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 24303946-24313945 Setaria italica
Seita.3G271200 10.0kb downstream 10.0kb downstream 14899 true scaffold_3: 24313946-24328844 Setaria italica
Seita.3G271200 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 24318845-24328844 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193083 5267 Panicoideae View MSA
124576305 5269 Grass View MSA
122044477 5273 Angiosperm View MSA
121344831 5274 Embryophyte View MSA
123426412 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.933        
cufflinks 0.811        
cufflinks 0.643        
cufflinks 0.562       Low
cufflinks 0.527       Low
cufflinks 1.003        
cufflinks 0.506       Low
cufflinks 1.243        
cufflinks 0.754        
cufflinks 2.421       High
cufflinks 0.779        
cufflinks 1.234        
cufflinks 1.093        
cufflinks 1.165        
cufflinks 0.879        
cufflinks 0.622       Low
cufflinks 1.505       High
cufflinks 1.217        
cufflinks 0.795        
cufflinks 1.261        

0 Strain