Gene : Seita.3G285100 S. italica v2.2
Genomic Order:  2851 Name:  ? Seita.3G285100
Secondary Identifier:  ? PAC:32710380
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G285100 0.5kb upstream 0.5kb upstream 1051 true scaffold_3: 26864584-26865634 Setaria italica
Seita.3G285100 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 26864584-26865083 Setaria italica
Seita.3G285100 0.5kb downstream 0.5kb downstream 1051 true scaffold_3: 26865084-26866134 Setaria italica
Seita.3G285100 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 26865635-26866134 Setaria italica
Seita.3G285100 1.0kb upstream 1.0kb upstream 1551 true scaffold_3: 26864084-26865634 Setaria italica
Seita.3G285100 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 26864084-26865083 Setaria italica
Seita.3G285100 1.0kb downstream 1.0kb downstream 1551 true scaffold_3: 26865084-26866634 Setaria italica
Seita.3G285100 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 26865635-26866634 Setaria italica
Seita.3G285100 2.0kb upstream 2.0kb upstream 2551 true scaffold_3: 26863084-26865634 Setaria italica
Seita.3G285100 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 26863084-26865083 Setaria italica
Seita.3G285100 2.0kb downstream 2.0kb downstream 2551 true scaffold_3: 26865084-26867634 Setaria italica
Seita.3G285100 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 26865635-26867634 Setaria italica
Seita.3G285100 5.0kb upstream 5.0kb upstream 5551 true scaffold_3: 26860084-26865634 Setaria italica
Seita.3G285100 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 26860084-26865083 Setaria italica
Seita.3G285100 5.0kb downstream 5.0kb downstream 5551 true scaffold_3: 26865084-26870634 Setaria italica
Seita.3G285100 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 26865635-26870634 Setaria italica
Seita.3G285100 10.0kb upstream 10.0kb upstream 10551 true scaffold_3: 26855084-26865634 Setaria italica
Seita.3G285100 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 26855084-26865083 Setaria italica
Seita.3G285100 10.0kb downstream 10.0kb downstream 10551 true scaffold_3: 26865084-26875634 Setaria italica
Seita.3G285100 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 26865635-26875634 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194300 5267 Panicoideae View MSA
124591138 5269 Grass View MSA
122051638 5273 Angiosperm View MSA
121312593 5274 Embryophyte View MSA
123349751 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.502        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain