Gene : Seita.3G296200 S. italica v2.2
Defline:  (1 of 3) PTHR11802:SF71 - SERINE CARBOXYPEPTIDASE-LIKE 26-RELATED Genomic Order:  2962
Name:  ? Seita.3G296200 Secondary Identifier:  ? PAC:32712703
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G296200 0.5kb upstream 0.5kb upstream 4234 true scaffold_3: 32372841-32377074 Setaria italica
Seita.3G296200 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 32372841-32373340 Setaria italica
Seita.3G296200 0.5kb downstream 0.5kb downstream 4234 true scaffold_3: 32373341-32377574 Setaria italica
Seita.3G296200 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 32377075-32377574 Setaria italica
Seita.3G296200 1.0kb upstream 1.0kb upstream 4734 true scaffold_3: 32372341-32377074 Setaria italica
Seita.3G296200 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 32372341-32373340 Setaria italica
Seita.3G296200 1.0kb downstream 1.0kb downstream 4734 true scaffold_3: 32373341-32378074 Setaria italica
Seita.3G296200 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 32377075-32378074 Setaria italica
Seita.3G296200 2.0kb upstream 2.0kb upstream 5734 true scaffold_3: 32371341-32377074 Setaria italica
Seita.3G296200 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 32371341-32373340 Setaria italica
Seita.3G296200 2.0kb downstream 2.0kb downstream 5734 true scaffold_3: 32373341-32379074 Setaria italica
Seita.3G296200 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 32377075-32379074 Setaria italica
Seita.3G296200 5.0kb upstream 5.0kb upstream 8734 true scaffold_3: 32368341-32377074 Setaria italica
Seita.3G296200 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 32368341-32373340 Setaria italica
Seita.3G296200 5.0kb downstream 5.0kb downstream 8734 true scaffold_3: 32373341-32382074 Setaria italica
Seita.3G296200 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 32377075-32382074 Setaria italica
Seita.3G296200 10.0kb upstream 10.0kb upstream 13734 true scaffold_3: 32363341-32377074 Setaria italica
Seita.3G296200 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 32363341-32373340 Setaria italica
Seita.3G296200 10.0kb downstream 10.0kb downstream 13734 true scaffold_3: 32373341-32387074 Setaria italica
Seita.3G296200 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 32377075-32387074 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193911 5267 Panicoideae View MSA
124579115 5269 Grass View MSA
122046217 5273 Angiosperm View MSA
121349139 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.161        
cufflinks 0.271       High
cufflinks 0.069     Low  
cufflinks 0.044     Low  
cufflinks 0.114        
cufflinks 0.189        
cufflinks 0.037     Low  
cufflinks 0.036     Low  
cufflinks 0.139        
cufflinks 0.089     Low  
cufflinks 0.199        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.074     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.002     Low Low
cufflinks 0.032     Low  
cufflinks 0.067     Low  
cufflinks 0.002     Low Low

0 Strain