Gene : Seita.3G392100 S. italica v2.2
Defline:  (1 of 3) PTHR24115:SF339 - DI-GLUCOSE BINDING PROTEIN WITH KINESIN MOTOR DOMAIN Genomic Order:  3921
Name:  ? Seita.3G392100 Secondary Identifier:  ? PAC:32710435
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G392100 0.5kb upstream 0.5kb upstream 8524 true scaffold_3: 49333702-49342225 Setaria italica
Seita.3G392100 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 49333702-49334201 Setaria italica
Seita.3G392100 0.5kb downstream 0.5kb downstream 8524 true scaffold_3: 49334202-49342725 Setaria italica
Seita.3G392100 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 49342226-49342725 Setaria italica
Seita.3G392100 1.0kb upstream 1.0kb upstream 9024 true scaffold_3: 49333202-49342225 Setaria italica
Seita.3G392100 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 49333202-49334201 Setaria italica
Seita.3G392100 1.0kb downstream 1.0kb downstream 9024 true scaffold_3: 49334202-49343225 Setaria italica
Seita.3G392100 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 49342226-49343225 Setaria italica
Seita.3G392100 2.0kb upstream 2.0kb upstream 10024 true scaffold_3: 49332202-49342225 Setaria italica
Seita.3G392100 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 49332202-49334201 Setaria italica
Seita.3G392100 2.0kb downstream 2.0kb downstream 10024 true scaffold_3: 49334202-49344225 Setaria italica
Seita.3G392100 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 49342226-49344225 Setaria italica
Seita.3G392100 5.0kb upstream 5.0kb upstream 13024 true scaffold_3: 49329202-49342225 Setaria italica
Seita.3G392100 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 49329202-49334201 Setaria italica
Seita.3G392100 5.0kb downstream 5.0kb downstream 13024 true scaffold_3: 49334202-49347225 Setaria italica
Seita.3G392100 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 49342226-49347225 Setaria italica
Seita.3G392100 10.0kb upstream 10.0kb upstream 18024 true scaffold_3: 49324202-49342225 Setaria italica
Seita.3G392100 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 49324202-49334201 Setaria italica
Seita.3G392100 10.0kb downstream 10.0kb downstream 18024 true scaffold_3: 49334202-49352225 Setaria italica
Seita.3G392100 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 49342226-49352225 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041439 5273 Angiosperm View MSA
122191455 5267 Panicoideae View MSA
124575632 5269 Grass View MSA
123429039 5275 Viridiplantae View MSA
121349532 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.075        
cufflinks 2.98        
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.607        
cufflinks 1.672        
cufflinks 1.855        
cufflinks 1.068        
cufflinks 0.667        
cufflinks 1.184        
cufflinks 0.85        
cufflinks 0.401        
cufflinks 0.003     Low Low
cufflinks 1.677        
cufflinks 0.16        
cufflinks 1.25        
cufflinks 0.047     Low  
cufflinks 0.004     Low Low
cufflinks 1.512        

0 Strain