Gene : Seita.4G002500 S. italica v2.2
Defline:  (1 of 1) 2.3.2.5 - Glutaminyl-peptide cyclotransferase / Glutaminyl-tRNA cyclotransferase Genomic Order:  25
Name:  ? Seita.4G002500 Secondary Identifier:  ? PAC:32707449
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G002500 0.5kb upstream 0.5kb upstream 4658 true scaffold_4: 205697-210354 Setaria italica
Seita.4G002500 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 209855-210354 Setaria italica
Seita.4G002500 0.5kb downstream 0.5kb downstream 4658 true scaffold_4: 205197-209854 Setaria italica
Seita.4G002500 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 205197-205696 Setaria italica
Seita.4G002500 1.0kb upstream 1.0kb upstream 5158 true scaffold_4: 205697-210854 Setaria italica
Seita.4G002500 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 209855-210854 Setaria italica
Seita.4G002500 1.0kb downstream 1.0kb downstream 5158 true scaffold_4: 204697-209854 Setaria italica
Seita.4G002500 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 204697-205696 Setaria italica
Seita.4G002500 2.0kb upstream 2.0kb upstream 6158 true scaffold_4: 205697-211854 Setaria italica
Seita.4G002500 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 209855-211854 Setaria italica
Seita.4G002500 2.0kb downstream 2.0kb downstream 6158 true scaffold_4: 203697-209854 Setaria italica
Seita.4G002500 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 203697-205696 Setaria italica
Seita.4G002500 5.0kb upstream 5.0kb upstream 9158 true scaffold_4: 205697-214854 Setaria italica
Seita.4G002500 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 209855-214854 Setaria italica
Seita.4G002500 5.0kb downstream 5.0kb downstream 9158 true scaffold_4: 200697-209854 Setaria italica
Seita.4G002500 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 200697-205696 Setaria italica
Seita.4G002500 10.0kb upstream 10.0kb upstream 14158 true scaffold_4: 205697-219854 Setaria italica
Seita.4G002500 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 209855-219854 Setaria italica
Seita.4G002500 10.0kb downstream 10.0kb downstream 14158 true scaffold_4: 195697-209854 Setaria italica
Seita.4G002500 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 195697-205696 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185105 5267 Panicoideae View MSA
124575182 5269 Grass View MSA
122047891 5273 Angiosperm View MSA
121348416 5274 Embryophyte View MSA
123426276 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.707        
cufflinks 7.962       High
cufflinks 2.763       Low
cufflinks 2.265       Low
cufflinks 2.47       Low
cufflinks 7.573       High
cufflinks 5.791        
cufflinks 6.039        
cufflinks 4.122        
cufflinks 5.357        
cufflinks 5.568        
cufflinks 6.355        
cufflinks 4.449        
cufflinks 3.247        
cufflinks 6.849        
cufflinks 5.311        
cufflinks 7.454       High
cufflinks 3.779        
cufflinks 2.456       Low
cufflinks 7.915       High

0 Strain