Gene : Seita.4G073600 S. italica v2.2
Genomic Order:  736 Name:  ? Seita.4G073600
Secondary Identifier:  ? PAC:32707426
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G073600 0.5kb upstream 0.5kb upstream 2797 true scaffold_4: 5657328-5660124 Setaria italica
Seita.4G073600 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 5657328-5657827 Setaria italica
Seita.4G073600 0.5kb downstream 0.5kb downstream 2797 true scaffold_4: 5657828-5660624 Setaria italica
Seita.4G073600 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 5660125-5660624 Setaria italica
Seita.4G073600 1.0kb upstream 1.0kb upstream 3297 true scaffold_4: 5656828-5660124 Setaria italica
Seita.4G073600 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 5656828-5657827 Setaria italica
Seita.4G073600 1.0kb downstream 1.0kb downstream 3297 true scaffold_4: 5657828-5661124 Setaria italica
Seita.4G073600 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 5660125-5661124 Setaria italica
Seita.4G073600 2.0kb upstream 2.0kb upstream 4297 true scaffold_4: 5655828-5660124 Setaria italica
Seita.4G073600 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 5655828-5657827 Setaria italica
Seita.4G073600 2.0kb downstream 2.0kb downstream 4297 true scaffold_4: 5657828-5662124 Setaria italica
Seita.4G073600 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 5660125-5662124 Setaria italica
Seita.4G073600 5.0kb upstream 5.0kb upstream 7297 true scaffold_4: 5652828-5660124 Setaria italica
Seita.4G073600 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 5652828-5657827 Setaria italica
Seita.4G073600 5.0kb downstream 5.0kb downstream 7297 true scaffold_4: 5657828-5665124 Setaria italica
Seita.4G073600 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 5660125-5665124 Setaria italica
Seita.4G073600 10.0kb upstream 10.0kb upstream 12297 true scaffold_4: 5647828-5660124 Setaria italica
Seita.4G073600 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 5647828-5657827 Setaria italica
Seita.4G073600 10.0kb downstream 10.0kb downstream 12297 true scaffold_4: 5657828-5670124 Setaria italica
Seita.4G073600 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 5660125-5670124 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122199416 5267 Panicoideae View MSA
124590273 5269 Grass View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.039     Low  
cufflinks 0.116     Low  
cufflinks 0.374       High
cufflinks 0.098        
cufflinks 0.088        
cufflinks 0.054     Low  
cufflinks 0.067     Low  
cufflinks 0.162        
cufflinks 0.153        
cufflinks 0.43       High
cufflinks 0.024     Low Low
cufflinks 0.051     Low  
cufflinks 0.014     Low Low
cufflinks 0.091     Low  
cufflinks 0.046     Low  
cufflinks 0.07     Low  
cufflinks 0.157        
cufflinks 0.139        
cufflinks 0.091     Low  
cufflinks 0.058     Low  

0 Strain