Protein Family : retrotransposon protein, putative, unclassified, expressed 124590273

Method ID:  5269 Method Name:  Grass
Sequence Alignment:  View MSA Member Count:  469

469 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Traes_1AL_67A867940 (1 of 58) PF14214 - Helitron helicase-like domain at N-terminus (Helitron_like_N) T. aestivum v2.2 3432   ta_iwgsc_1al_v2_3977574: 15-3446
Traes_1BL_CECF68364 (1 of 58) PF14214 - Helitron helicase-like domain at N-terminus (Helitron_like_N) T. aestivum v2.2 4374   ta_iwgsc_1bl_v1_3840602: 339-4712
Traes_1BS_6CAD661F5 (1 of 58) PF14214 - Helitron helicase-like domain at N-terminus (Helitron_like_N) T. aestivum v2.2 7409   ta_iwgsc_1bs_v1_3429933: 205-7613
Traes_2AL_266BC84F3 (1 of 5) PTHR23273//PTHR23273:SF14 - REPLICATION FACTOR A 1, RFA1 T. aestivum v2.2 11726   ta_iwgsc_2al_v1_6349530: 2465-14190
Traes_2BL_AD318CB8E (1 of 58) PF14214 - Helitron helicase-like domain at N-terminus (Helitron_like_N) T. aestivum v2.2 2274   ta_iwgsc_2bl_v1_8035806: 2133-4406
Traes_2DL_84AF4FF18 (1 of 58) PF14214 - Helitron helicase-like domain at N-terminus (Helitron_like_N) T. aestivum v2.2 4872   ta_iwgsc_2dl_v1_9909771: 478-5349
Traes_2DS_79345D741 (1 of 1) PTHR23273//PTHR23273:SF9 - REPLICATION FACTOR A 1, RFA1 T. aestivum v2.2 1805   ta_iwgsc_2ds_v1_5352386: 2511-4315
Traes_4AL_398B38CAB (1 of 5) PTHR23273//PTHR23273:SF14 - REPLICATION FACTOR A 1, RFA1 T. aestivum v2.2 3729   ta_iwgsc_4al_v2_7062749: 807-4535
Traes_4BL_A333343E8 (1 of 7) PTHR23273//PTHR23273:SF10 - REPLICATION FACTOR A 1, RFA1 T. aestivum v2.2 3522   ta_iwgsc_4bl_v1_7035032: 2694-6215
Traes_5DL_130F4D1F9 (1 of 5) PF05970//PF14214 - PIF1-like helicase (PIF1) // Helitron helicase-like domain at N-terminus (Helitron_like_N) T. aestivum v2.2 3000   ta_iwgsc_5dl_v1_3305665: 2046-5045
Traes_6DL_9F6A76C88 (1 of 5) PTHR23273//PTHR23273:SF14 - REPLICATION FACTOR A 1, RFA1 T. aestivum v2.2 3744   ta_iwgsc_6dl_v1_3277342: 1029-4772
Traes_6DS_19EF1ECCC (1 of 58) PF14214 - Helitron helicase-like domain at N-terminus (Helitron_like_N) T. aestivum v2.2 10001   ta_iwgsc_6ds_v1_2059279: 1608-11608
Traes_7AL_C95FA61AF (1 of 5) PF05970//PF14214 - PIF1-like helicase (PIF1) // Helitron helicase-like domain at N-terminus (Helitron_like_N) T. aestivum v2.2 3189   ta_iwgsc_7al_v1_4555815: 1335-4523
Seita.1G177100 (1 of 2) PTHR23273//PTHR23273:SF9 - REPLICATION FACTOR A 1, RFA1 S. italica v2.2 2980   scaffold_1: 25487370-25490349
Seita.2G030100 (1 of 8) PTHR23273//PTHR23273:SF14 - REPLICATION FACTOR A 1, RFA1 S. italica v2.2 672   scaffold_2: 2439575-2440246
Seita.3G238100   S. italica v2.2 1305   scaffold_3: 20134946-20136250
Seita.4G073600   S. italica v2.2 2297   scaffold_4: 5657828-5660124
Seita.6G127000 (1 of 8) PTHR23273//PTHR23273:SF14 - REPLICATION FACTOR A 1, RFA1 S. italica v2.2 513   scaffold_6: 21810022-21810534
Seita.6G154300 (1 of 2) PTHR23273//PTHR23273:SF9 - REPLICATION FACTOR A 1, RFA1 S. italica v2.2 923   scaffold_6: 27387798-27388720
Seita.9G053000 (1 of 8) PTHR23273//PTHR23273:SF14 - REPLICATION FACTOR A 1, RFA1 S. italica v2.2 1979   scaffold_9: 3044398-3046376
Seita.9G209500 (1 of 2) PTHR23273//PTHR23273:SF10 - REPLICATION FACTOR A 1, RFA1 S. italica v2.2 3638   scaffold_9: 15082955-15086592
Bradi1g20112 (1 of 4) PTHR23273//PTHR23273:SF14 - REPLICATION FACTOR A 1, RFA1 B. distachyon v3.1 2377   Bd1: 16116057-16118433
Bradi1g16980 (1 of 2) PF05970//PF14214 - PIF1-like helicase (PIF1) // Helitron helicase-like domain at N-terminus (Helitron_like_N) B. distachyon v3.1 3434   Bd1: 13661149-13664582
Bradi5g03020 (1 of 4) PTHR23273:SF15 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A B. distachyon v3.1 20299   Bd5: 3339856-3360154
Bradi1g40710   B. distachyon v3.1 3314   Bd1: 37416850-37420163
Bradi2g22725 (1 of 7) PF16900 - Replication protein A OB domain (REPA_OB_2) B. distachyon v3.1 1485   Bd2: 20218891-20220375
Bradi4g18359 (1 of 25) PTHR23273 - REPLICATION FACTOR A 1, RFA1 B. distachyon v3.1 3291   Bd4: 20559552-20562842
Bradi2g55313 (1 of 1) PTHR23273//PTHR23273:SF10 - REPLICATION FACTOR A 1, RFA1 B. distachyon v3.1 2121   Bd2: 53759294-53761414
Bradi4g18320 (1 of 2) KOG0851 - Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins B. distachyon v3.1 9173   Bd4: 20427306-20436478
Bradi4g14639 (1 of 5) PF02721 - Domain of unknown function DUF223 (DUF223) B. distachyon v3.1 1693   Bd4: 15242763-15244455

469 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Traes_2DL_84AF4FF18.1 T. aestivum v2.2 124590273 retrotransposon protein, putative, unclassified, expressed 13 5269 Grass
Traes_1AL_67A867940.1 T. aestivum v2.2 124590273 retrotransposon protein, putative, unclassified, expressed 13 5269 Grass
Traes_2DS_79345D741.1 T. aestivum v2.2 124590273 retrotransposon protein, putative, unclassified, expressed 13 5269 Grass
Traes_1BL_CECF68364.1 T. aestivum v2.2 124590273 retrotransposon protein, putative, unclassified, expressed 13 5269 Grass
Traes_5DL_130F4D1F9.1 T. aestivum v2.2 124590273 retrotransposon protein, putative, unclassified, expressed 13 5269 Grass
Traes_4AL_398B38CAB.2 T. aestivum v2.2 124590273 retrotransposon protein, putative, unclassified, expressed 13 5269 Grass
Traes_2AL_266BC84F3.2 T. aestivum v2.2 124590273 retrotransposon protein, putative, unclassified, expressed 13 5269 Grass
Traes_4BL_A333343E8.1 T. aestivum v2.2 124590273 retrotransposon protein, putative, unclassified, expressed 13 5269 Grass
Traes_7AL_C95FA61AF.1 T. aestivum v2.2 124590273 retrotransposon protein, putative, unclassified, expressed 13 5269 Grass
Traes_1BS_6CAD661F5.21 T. aestivum v2.2 124590273 retrotransposon protein, putative, unclassified, expressed 13 5269 Grass
Traes_6DS_19EF1ECCC.1 T. aestivum v2.2 124590273 retrotransposon protein, putative, unclassified, expressed 13 5269 Grass
Traes_2BL_AD318CB8E.1 T. aestivum v2.2 124590273 retrotransposon protein, putative, unclassified, expressed 13 5269 Grass
Traes_6DL_9F6A76C88.2 T. aestivum v2.2 124590273 retrotransposon protein, putative, unclassified, expressed 13 5269 Grass
Seita.9G053000.1.p S. italica v2.2 124590273 retrotransposon protein, putative, unclassified, expressed 8 5269 Grass
Seita.6G127000.1.p S. italica v2.2 124590273 retrotransposon protein, putative, unclassified, expressed 8 5269 Grass
Seita.6G154300.1.p S. italica v2.2 124590273 retrotransposon protein, putative, unclassified, expressed 8 5269 Grass
Seita.3G238100.1.p S. italica v2.2 124590273 retrotransposon protein, putative, unclassified, expressed 8 5269 Grass
Seita.2G030100.1.p S. italica v2.2 124590273 retrotransposon protein, putative, unclassified, expressed 8 5269 Grass
Bradi2g55313.1.p B. distachyon v3.1 124590273 retrotransposon protein, putative, unclassified, expressed 9 5269 Grass
Bradi2g22725.1.p B. distachyon v3.1 124590273 retrotransposon protein, putative, unclassified, expressed 9 5269 Grass
Bradi4g18320.2.p B. distachyon v3.1 124590273 retrotransposon protein, putative, unclassified, expressed 9 5269 Grass
Bradi4g18359.1.p B. distachyon v3.1 124590273 retrotransposon protein, putative, unclassified, expressed 9 5269 Grass
Bradi4g14639.1.p B. distachyon v3.1 124590273 retrotransposon protein, putative, unclassified, expressed 9 5269 Grass
Bradi1g40710.1.p B. distachyon v3.1 124590273 retrotransposon protein, putative, unclassified, expressed 9 5269 Grass
Bradi1g20112.2.p B. distachyon v3.1 124590273 retrotransposon protein, putative, unclassified, expressed 9 5269 Grass
Bradi1g16980.1.p B. distachyon v3.1 124590273 retrotransposon protein, putative, unclassified, expressed 9 5269 Grass
Bradi5g03020.1.p B. distachyon v3.1 124590273 retrotransposon protein, putative, unclassified, expressed 9 5269 Grass
Brast06G124500.1.p B. stacei v1.1 124590273 retrotransposon protein, putative, unclassified, expressed 7 5269 Grass
Brast03G112700.1.p B. stacei v1.1 124590273 retrotransposon protein, putative, unclassified, expressed 7 5269 Grass
Brast03G121600.1.p B. stacei v1.1 124590273 retrotransposon protein, putative, unclassified, expressed 7 5269 Grass