Gene : Seita.9G053000 S. italica v2.2
Defline:  (1 of 8) PTHR23273//PTHR23273:SF14 - REPLICATION FACTOR A 1, RFA1 Genomic Order:  530
Name:  ? Seita.9G053000 Secondary Identifier:  ? PAC:32691066
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G053000 0.5kb upstream 0.5kb upstream 2479 true scaffold_9: 3044398-3046876 Setaria italica
Seita.9G053000 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3046377-3046876 Setaria italica
Seita.9G053000 0.5kb downstream 0.5kb downstream 2479 true scaffold_9: 3043898-3046376 Setaria italica
Seita.9G053000 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3043898-3044397 Setaria italica
Seita.9G053000 1.0kb upstream 1.0kb upstream 2979 true scaffold_9: 3044398-3047376 Setaria italica
Seita.9G053000 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3046377-3047376 Setaria italica
Seita.9G053000 1.0kb downstream 1.0kb downstream 2979 true scaffold_9: 3043398-3046376 Setaria italica
Seita.9G053000 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3043398-3044397 Setaria italica
Seita.9G053000 2.0kb upstream 2.0kb upstream 3979 true scaffold_9: 3044398-3048376 Setaria italica
Seita.9G053000 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3046377-3048376 Setaria italica
Seita.9G053000 2.0kb downstream 2.0kb downstream 3979 true scaffold_9: 3042398-3046376 Setaria italica
Seita.9G053000 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3042398-3044397 Setaria italica
Seita.9G053000 5.0kb upstream 5.0kb upstream 6979 true scaffold_9: 3044398-3051376 Setaria italica
Seita.9G053000 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3046377-3051376 Setaria italica
Seita.9G053000 5.0kb downstream 5.0kb downstream 6979 true scaffold_9: 3039398-3046376 Setaria italica
Seita.9G053000 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3039398-3044397 Setaria italica
Seita.9G053000 10.0kb upstream 10.0kb upstream 11979 true scaffold_9: 3044398-3056376 Setaria italica
Seita.9G053000 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3046377-3056376 Setaria italica
Seita.9G053000 10.0kb downstream 10.0kb downstream 11979 true scaffold_9: 3034398-3046376 Setaria italica
Seita.9G053000 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3034398-3044397 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122190674 5267 Panicoideae View MSA
124590273 5269 Grass View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain